Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02866 ATGTTGATTCAGATTCCTCGCCTTACAAATTCTCTCAGAGACCCCTTCGATATCGACCAAGCTTATCTCCATCGCAAAACCGTTCTTCAAAATCGAAACACTCGCAATGTTGCAAGCTCGCTTGATGAATCTGAACTCGCGCGGAAAATTGTACATGGTTGGGAAGAAGCTTCAGCGGAAGTGCGGCAAGCCTACAAGCAGTTTATAGGAGCAGTAGTGGGCTTGGTTGATGGAGAAATGCGCTCTGAGGATTTCCATGAGGTGGCACTGACCGTGTACCGTCTTTTCAGCAGGCCAATTGATGAGGAGGATTCTATCGATAAAATTATTTATGATAAAAAGTTAGAATTGCAAAACCTTGTTGGTCATGCAATTGCTGATGCCAAGTTGAGGGAAGTTGCAGCTATAGCACAGAAACTCTTAAATTTGCAGCCCAACAATACAAATTCTTCTGTGTCTTTGGAAAGAGATCATGATGTTGAGGAGGGTATGGAATTTGGAGATGATTTGGTTTTTCAAGCCCCAGCTCGTTTCTTGGTTGATGTATCTTTAGATGACGGAGACATAATGGATTTTAAAAACACAGTTTCATTAGGATTTAAGAAAGAAGAGTATAGTCATACTGACCCAACCGACCATTTTGCTGTCGAAGTAGAAAAGTTCAATTTGACTTGGTTAAGAGATGCATGTGATAAAATTGTTAGGAATTGTAATTCAGAGTTATCTCGAGATGAACTAGCAATGGCCATTTGTAGGGTTCTTTATTCAGAAAAGCCCGGCGAAGAGATTGCCGGAGATTTGTTGGACCTTGTCGGGGATAGTGCATTTGAAACTGTGCAAAATCTTCTATTGCACCGGAAGGAGATTGTTGATTCTATTCAATATGGCTTATCTGTATTGAAGTCTGATAAGAATGCTTCAAATGCTCAGTCTCGCATGCCTAGTTTTGGGACACAGGTGACTGTGCACACAGAATCAGAAAAACAAATTGACAAGCTTCGACGCAAGGAGGAAAAGAGAAACAGACGAGGAATAGAACATGCTGGGGATGGCGACTTGTCTACACTGGATTTCTCATCTTTACTTCAAGCAAGTGAGAGGAAAAATTTGGTTGATGTGATGATTGGTTCTGGAGATAGGTCAATAGCTGTTAATGCTCTTCCAGAAGGAACTATCAGAAAGTATCGTGAGGGGTATGAAGAGGTTATTATTCCCCCAAAACCAACTGCGCCAATGAAACCTGGAGAAAAGCTGATTGAGATCCGGGAGTTAGATGACTTTGCTCAAGCTGCTTTCCGTGGTTACAAATCGCTAAACCGTATTCAGAGCAGGATATATCAAACTGTTTATGGAACCAACGAAAATATACTAGTGTGTGCCCCCACAGGAGCTGGCAAAACTAACATAGCTATGATTTCAATTCTTCATGAGATTGGACAACACTTCAAGGATGGTTACTTGCATAAAGATAAATTTAAGATAGTTTATGTTGCTCCAATGAAGGCTTTGGCTGCAGAAGTCACATCAACATTCAGCCAACGTTTATCTCCGTTGAATATGAGTGTCAGAGAGCTTACTGGAGATATGCAGCTCTCTAAAAATGAACTAGAAGAAACTCAGATGATAGTGACAACTCCTGAGAAATGGGATGTCATAACTCGCAAGAGTAGTGACATGTCACTCTCGATGCTGGTGAAGCTCTTAATTATTGATGAAGTGCATCTACTCAATGACGATAGAGGTCCTGTTATAGAAGCTTTAGTTGCTAGGACACTGCGGCAGGTGGAGTCAAGCCAGTCAATGATACGCATTGTGGGCCTTTCTGCCACACTCCCCAATTACCTAGAGGTTGCACAGTTTCTAAGAGTAAATCCAGACACAGGCCTTTTCTTCTTTGATTCAAGTTATCGCCCAGTGCCTCTTGCACAACAGTATATTGGAATTAGTGAGCCAAACTTTGCAGCTCGTAATGAATTGTTGAATGTTATATGCTATAGAAAGGTTGCTGATTCTATTAGGCAAGGTCATCAGGCAATGGTGTTTGTTCATTCACGAAAAGACACTGCAAAGACTGCTCAGAAACTGACTGAACTTGCACGAGCGAATGATGACCTTGAACTCTTCAATAATGACACACATCCACATTATTTCTTTATGAAGAAAGAAGTCGTTAAATCAAGAAACAAAGATCTTGTTCAACTTTTTGAACTTGGCATGGGTATTCATCATGCTGGGATGTTACGTTCAGATAGAGGACTGACAGAGAGGCTTTTTTCTGAAGGACTTTTGAAGGTACTTGTCTGTACAGCAACTCTGGCATGGGGTGTCAATCTACCTGCTCACACAGTTGTAATTAAGGGAACTCAAATATATGATCCTAAAGCTGGTGGGTGGCGAGACCTGGGTATGCTTGATGTGATGCAGATATTTGGTCGAGCTGGGAGACCACAGTTTGATAAAAGTGGTGAAGGTATCATAATTACATCTCACGACAAACTAGCATATTATTTGCGACTACTGACAAGTCAACTCCCTATAGAAAGCCAGTTTATTAGCTCGTTGAAAGATAATTTGAATGCAGAAGTGGCATTGGGCACCGTAACTAATGTTAAGGAAGCCTGTGCATGGCTAGGATATACTTATCTTTTCATAAGGATGAGGATGAATCCTTTGGCATATGGTATTGGTTGGGATGAGGTGATGGCAGATCCTGCTTTGAGTTCTAAGCAAAGATCTCTTGTTATTGATGCTGCACGTTCACTTGATAAAGCAAAAATGATGAGGTTTGATGAGAAAAGTGGCAATTTTTACTGCACGGAGCTTGGTCGCATTGCAAGCCACTTTTACATTCAATATTCCAGTGTTGAAACATACAATGAAATGTTGAGGCGTCACATGAATGATAGTGAGGTGATTAACATGGTTGCACATTCATCTGAATTTGAGAATATTGCTGTTCGAGAAGAAGAGCAGAATGAGCTAGAGACGTTGGCACGCACATCATGTCCATTAGAAATTAAGGGTGGTCCTTCCAACAAACATGGAAAGATTTCTATTCTGATTCAGTTGTACATATCTCGAGGCTCTATAGATTCCTTCTCTTTGATTTCTGACGCTTCATACATAAGTGCAAGCTTGGCTCGTATTATGCGCGCTTTATTTGAGATTTGTTTACGAAGAGGCTGGTGTGAGATGTCTTTGTTCATGTTGGAATATTGCAAAGCAGTAGATCGCCAAGTTTGGCCGCACCAACATCCACTTAGACAATTTGACCGGGACCTTTCTGGAGAAATATTGCGGAAGCTTGAAGAGCGAGGGGCTGACTTAGATCACCTGATGGAGATGGAGGAAAAAGACATTGGGGCATTAATTCGTTATGCACCTGGAGGAAGGTTGGTCAAGCAATACCTTGGGTATTTTCCGTCACTTCAGTTATCAGCAACTGTGAGTCCAATAACCAGAACTGTCTTGAAGATTGATCTGGTCATAACACCTGCTTTTATTTGGAAAGATCGTTTTCATGGTACTGCTCAACGCTGGTGGATTTTGGTAGAGGACTCTGAGAATGATCATATTTACCACTCGGAACTTTTGACCCTTACAAAGCGGATGGCTAAGGGGGAACCTTACAAACTCTCCTTCACCGTGCCTATATTTGAACCACATCCACCGCAATATTACATTCATGCCATTTCTGATTCATGGCTTCATGCAGAGGCATTCTACACTATTACCTTTCATAATTTACTATTGCCAGAGGTCCGTACTTCTCATACAGAACTCCTTGATTTAAAGCCTCTTCCAGTGTCTTCTCTTGGAAACATTGATCATGAAGGGCTGTATAAATTTTCACATTTTAACCCAATACAAACACAGACTTTTCATGTCTTGTATCACACGGACAATAATGTTCTATTAGGAGCTCCAACTGGAAGTGGAAAAACTATATCTGCTGAACTTGCTATGCTCCGGCTTTTCAACACCCAGCCTGATATGAAGGTTATTTATATAGCACCTTTGAAGGCTATTGTTAGGGAAAGAATGAGTGACTGGAAAAAGCGTCTTGTGTCTCAACTGGGGAAAAAAATGGTTGAAATGACTGGAGACTATACTCCTGATTTGATGGCTCTCTTGTCATCCAATATCATCATATCTACTCCTGAAAAGTGGGATGGTATAAGTCGTAATTGGCATAGCCGTAGCTATGTCACAAAGGTTGGACTTATCATATTGGATGAAATTCACTTGTTGGGAGCTGATCGTGGGCCCATCCTTGAGGTTATTGTTTCTAGGATGAGATATATATCATCACAAACAGAGCGTCCAGTACGGTTTGTAGGCCTTTCTACAGCTCTGGCAAATGCTGGTGATCTAGCTGATTGGTTAGGCGTGGAGGAGATCGGACTCTTCAATTTCAAGCCAAGTGGATATCCTGGAAAGTATTACTGCCCACGGATGAACAGTATGAATAAACCAGCATATGCTGCAATATGCACACATTCACCTGCGAAACCAGTTCTTATATTTGTCTCGTCACGGCGCCAAACAAGACTTACTGCACTAGATCTAATTCAGTTTGCTGCTTCAGATGAACATTCAAGGCAATTTCTTAACATGCCTGAAGAAGCATTGGAGATGGTTCTGTCTCAAGTCTCTGACCAAAACTTGAGGCATACTTTACAATTTGGCATCGGTTTACATCATGCAGGCCTGAATGACAAAGACAGATCTCTTGTTGAGGAACTTTTTGCAAACAACAAGATTCAGGTATTGGTTTGTACCAGCACATTGGCTTGGGGTGTGAATCTTCCAGCTCATCTAGTAATTATCAAGGGGACAGAATACTATGATGGAAAAGCTAAGAGGTACGTTGATTTTCCAATCACTGATATCTTGCAAATGATGGGTCGTGCTGGACGGCCTCAATTTGATCAACATGGGAAGGCAGTGATACTTGTTCATGAACCCAAGAAGAGCTTCTACAAAAAGTTCTTGTATGAACCCTTTCCTGTTGAAAGTAGTTTGAGGGAGCGGCTACATGATCACATAAATGCTGAAATTGTTTCTGGAACAATCTGCAATAAACAAGATGCAGTGCATTACCTTACATGGACTTACTTATTCCGTAGACTGATGGTCAATCCTGCGTACTATGGATTGGAGAATGTAGAACCTGAGTTTTTAAGTTCGTTCTTGTCTAGCCTAGTACAAAGCACATTTGAGGATTTGGAAGACAGTGGATGCATAAAGATGAATGAGGATGTGGTGGAGTCGGTGATGTTGGGGTCAGTAGCATCTCAGTATTACCTCAGCTACATGACTGTGTCAATGTTTGGTTCAAACATCGGTCCAGATACATCACTAGAAGTCTTTCTGCATGTCTTATCTGCTGCTTCCGAATTTGATGAACTTCCTGTGCGTCATAATGAGGAAAAATACAATGAAGCACTATCGGAGAAAGTTAGATATCCAGTGGATAAGAATCATTTGGAGGACCCTCATACCAAAGCAAATCTTCTATTTCAGTCTCATTTTTCCCAATTGGAGTTGCCAATTAGTGACTATGCCACAGACTTGAAATCAGTATTAGATCAGAGTATACGCATAATCCAGGCCATGATTGATGTATGTGCAAATAGTGGTTGGCTTTCGAGCTCTATAACTTGCATGCATCTTCTGCAAATGGTAATGCAGGGTTTATGGTTGGACAAAGACTCTTCGTTGTGGATGCTCCCATGCATGAATAATGATCTTATAACTTCACTAAGCAAAAGAGGGATTTATAGTTTACAAGAATTGCTAGATATCCCCAGGGCAGCATTGCAGACTGTCATTGGAAATTTCCCGGCTTCAAGATTGTACCAGGATTTACAGAATTTCCCTCATGTTAAAATGAAATTAAAGCTTCAGGAGAGGGAAACTGGTGGTGAGAGGTGCTACATATTAAACATCAGATTAGAAAAGCTCAATTCTAGACGACACTCATCTAGAGCATTTGTACCTCGATTTCCGAAGATAAAAGAGGAGCAATGGTGGTTGGTTCTTGGTAATACCTCTACGTCTGAGCTATATGCTCTGAAAAGAGTTTCTTTTTCGGATCACTTAGTTACATCGATGAAGTTGCCTATAACTGCAGCTAATCTTCAGGATGTAAAAGTGACTCTAGTCTCCGATTGTTACATTGGATTCGAACAAGTGCATTCGATTATATAA 6213 0.4106 MLIQIPRLTNSLRDPFDIDQAYLHRKTVLQNRNTRNVASSLDESELARKIVHGWEEASAEVRQAYKQFIGAVVGLVDGEMRSEDFHEVALTVYRLFSRPIDEEDSIDKIIYDKKLELQNLVGHAIADAKLREVAAIAQKLLNLQPNNTNSSVSLERDHDVEEGMEFGDDLVFQAPARFLVDVSLDDGDIMDFKNTVSLGFKKEEYSHTDPTDHFAVEVEKFNLTWLRDACDKIVRNCNSELSRDELAMAICRVLYSEKPGEEIAGDLLDLVGDSAFETVQNLLLHRKEIVDSIQYGLSVLKSDKNASNAQSRMPSFGTQVTVHTESEKQIDKLRRKEEKRNRRGIEHAGDGDLSTLDFSSLLQASERKNLVDVMIGSGDRSIAVNALPEGTIRKYREGYEEVIIPPKPTAPMKPGEKLIEIRELDDFAQAAFRGYKSLNRIQSRIYQTVYGTNENILVCAPTGAGKTNIAMISILHEIGQHFKDGYLHKDKFKIVYVAPMKALAAEVTSTFSQRLSPLNMSVRELTGDMQLSKNELEETQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVESSQSMIRIVGLSATLPNYLEVAQFLRVNPDTGLFFFDSSYRPVPLAQQYIGISEPNFAARNELLNVICYRKVADSIRQGHQAMVFVHSRKDTAKTAQKLTELARANDDLELFNNDTHPHYFFMKKEVVKSRNKDLVQLFELGMGIHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPAHTVVIKGTQIYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAYYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRMNPLAYGIGWDEVMADPALSSKQRSLVIDAARSLDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSVETYNEMLRRHMNDSEVINMVAHSSEFENIAVREEEQNELETLARTSCPLEIKGGPSNKHGKISILIQLYISRGSIDSFSLISDASYISASLARIMRALFEICLRRGWCEMSLFMLEYCKAVDRQVWPHQHPLRQFDRDLSGEILRKLEERGADLDHLMEMEEKDIGALIRYAPGGRLVKQYLGYFPSLQLSATVSPITRTVLKIDLVITPAFIWKDRFHGTAQRWWILVEDSENDHIYHSELLTLTKRMAKGEPYKLSFTVPIFEPHPPQYYIHAISDSWLHAEAFYTITFHNLLLPEVRTSHTELLDLKPLPVSSLGNIDHEGLYKFSHFNPIQTQTFHVLYHTDNNVLLGAPTGSGKTISAELAMLRLFNTQPDMKVIYIAPLKAIVRERMSDWKKRLVSQLGKKMVEMTGDYTPDLMALLSSNIIISTPEKWDGISRNWHSRSYVTKVGLIILDEIHLLGADRGPILEVIVSRMRYISSQTERPVRFVGLSTALANAGDLADWLGVEEIGLFNFKPSGYPGKYYCPRMNSMNKPAYAAICTHSPAKPVLIFVSSRRQTRLTALDLIQFAASDEHSRQFLNMPEEALEMVLSQVSDQNLRHTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKAKRYVDFPITDILQMMGRAGRPQFDQHGKAVILVHEPKKSFYKKFLYEPFPVESSLRERLHDHINAEIVSGTICNKQDAVHYLTWTYLFRRLMVNPAYYGLENVEPEFLSSFLSSLVQSTFEDLEDSGCIKMNEDVVESVMLGSVASQYYLSYMTVSMFGSNIGPDTSLEVFLHVLSAASEFDELPVRHNEEKYNEALSEKVRYPVDKNHLEDPHTKANLLFQSHFSQLELPISDYATDLKSVLDQSIRIIQAMIDVCANSGWLSSSITCMHLLQMVMQGLWLDKDSSLWMLPCMNNDLITSLSKRGIYSLQELLDIPRAALQTVIGNFPASRLYQDLQNFPHVKMKLKLQERETGGERCYILNIRLEKLNSRRHSSRAFVPRFPKIKEEQWWLVLGNTSTSELYALKRVSFSDHLVTSMKLPITAANLQDVKVTLVSDCYIGFEQVHSII 2070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02866 2070 FunFam U5 small nuclear ribonucleoprotein helicase 847 938 - -
Mepo5g02866 2070 Gene3D - 847 937 IPR036388 -
Mepo5g02866 2070 Coils Coil 1099 1119 - -
Mepo5g02866 2070 SMART AAA_5 452 633 IPR003593 GO:0016887
Mepo5g02866 2070 SMART AAA_5 1300 1471 IPR003593 GO:0016887
Mepo5g02866 2070 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1295 1470 IPR014001 -
Mepo5g02866 2070 SMART Sec63_2 938 1246 IPR004179 -
Mepo5g02866 2070 SMART Sec63_2 1758 2069 IPR004179 -
Mepo5g02866 2070 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1173 1468 IPR027417 -
Mepo5g02866 2070 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1476 1670 IPR027417 -
Mepo5g02866 2070 PIRSF BRR2 11 2070 - -
Mepo5g02866 2070 Gene3D - 1672 1765 IPR036388 -
Mepo5g02866 2070 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 398 622 IPR027417 -
Mepo5g02866 2070 Gene3D - 1474 1671 IPR027417 -
Mepo5g02866 2070 Pfam DEAD/DEAH box helicase 440 613 IPR011545 GO:0003676|GO:0005524
Mepo5g02866 2070 Pfam DEAD/DEAH box helicase 1288 1452 IPR011545 GO:0003676|GO:0005524
Mepo5g02866 2070 Gene3D C2 domain 1959 2070 IPR035892 -
Mepo5g02866 2070 Pfam Helicase conserved C-terminal domain 1554 1640 IPR001650 -
Mepo5g02866 2070 Pfam Helicase conserved C-terminal domain 673 815 IPR001650 -
Mepo5g02866 2070 FunFam Activating signal cointegrator 1 complex subunit 3 1474 1671 - -
Mepo5g02866 2070 SUPERFAMILY "Winged helix" DNA-binding domain 1670 1770 IPR036390 -
Mepo5g02866 2070 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 632 845 IPR027417 -
Mepo5g02866 2070 FunFam RNA helicase, activating signal cointegrator 1 426 637 - -
Mepo5g02866 2070 SUPERFAMILY "Winged helix" DNA-binding domain 845 950 IPR036390 -
Mepo5g02866 2070 SMART ultradead3 1282 1482 IPR014001 -
Mepo5g02866 2070 SMART ultradead3 434 645 IPR014001 -
Mepo5g02866 2070 CDD DEXHc_ASCC3_1 437 633 - -
Mepo5g02866 2070 FunFam U5 small nuclear ribonucleoprotein helicase 1082 1138 - -
Mepo5g02866 2070 CDD SF2_C_Ski2 637 828 - -
Mepo5g02866 2070 Gene3D - 426 637 IPR027417 -
Mepo5g02866 2070 Gene3D - 939 1081 - -
Mepo5g02866 2070 Gene3D - 1083 1137 - -
Mepo5g02866 2070 Gene3D - 1766 1902 - -
Mepo5g02866 2070 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 664 862 IPR001650 -
Mepo5g02866 2070 Pfam Sec63 Brl domain 938 1244 IPR004179 -
Mepo5g02866 2070 Gene3D - 638 840 IPR027417 -
Mepo5g02866 2070 SUPERFAMILY Sec63 N-terminal domain-like 966 1141 - -
Mepo5g02866 2070 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 447 629 IPR014001 -
Mepo5g02866 2070 Gene3D C2 domain 1140 1249 IPR035892 -
Mepo5g02866 2070 SUPERFAMILY Sec63 N-terminal domain-like 1791 1946 - -
Mepo5g02866 2070 FunFam RNA helicase, activating signal cointegrator 1 1140 1249 - -
Mepo5g02866 2070 FunFam DExH-box ATP-dependent RNA helicase DExH14 1961 2070 - -
Mepo5g02866 2070 FunFam U5 small nuclear ribonucleoprotein helicase 638 840 - -
Mepo5g02866 2070 MobiDBLite consensus disorder prediction 306 329 - -
Mepo5g02866 2070 MobiDBLite consensus disorder prediction 306 324 - -
Mepo5g02866 2070 Gene3D - 1250 1473 IPR027417 -
Mepo5g02866 2070 CDD DEXHc_ASCC3_2 1285 1473 - -
Mepo5g02866 2070 FunFam U5 small nuclear ribonucleoprotein helicase 939 1081 - -
Mepo5g02866 2070 PANTHER DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATED 313 1156 - -
Mepo5g02866 2070 FunFam U5 small nuclear ribonucleoprotein helicase 1672 1765 - -
Mepo5g02866 2070 FunFam Activating signal cointegrator 1 complex subunit 3 1765 1901 - -
Mepo5g02866 2070 CDD SF2_C_Ski2 1476 1654 - -
Mepo5g02866 2070 Pfam Sec63 Brl domain 1760 2069 IPR004179 -
Mepo5g02866 2070 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1490 1699 IPR001650 -
Mepo5g02866 2070 FunFam Activating signal cointegrator 1 complex subunit 1250 1473 - -
Mepo5g02866 2070 SMART helicmild6 1542 1642 IPR001650 -
Mepo5g02866 2070 SMART helicmild6 725 817 IPR001650 -
Mepo5g02866 2070 SUPERFAMILY E set domains 1979 2069 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02866 Mepo-Chr5 34780034 34813422 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02866 K18663 - gmx:100811503 3735.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g02866 5 34780034 34813422 Mepo5g02866 5 34780034 34813422 ECH