Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01853 ATGGGTACTTCTTCTAATACAGTCATGATGAGATGCTCTCCCAGCAACTCCCTCTTCAAAGCTCTGAAACCCAATTTCCGAAATTCGAATCTTGTTCCCAATTCATCACTTCCACTCTCTTCTTCAACGCAGATCAACAAAGGAGCATCAAGGTGCTCTCATAGTCATGGTGGTGGGACTGGGAGGGCATATGACGCATTGCTGTTGGATGCTGGCGGCACCCTGTTGCAATTGGCCAATCCTGTTGAGGATACTTATGCCACTATTGGATCCAAATACGGTTTGGCTGTGAATCCAGCTGAGATAAAGCAGGGATTTAAGAGAGCGTTTTCTGCTCAATGGTCTGAAAAACTACGATATCAGGGTGATGGGCGGCCATTTTGGAAATTTGTAGTTTCTGAAGCCACCGGTTGCGGAGACGAAGACTTTTTTGAGGAAGTTTATGAGTACTATGCAAAAGGTGATGCATGGCATCTTCCCAACGGAGCTTTTGACACAATGACTCTTCTCAAGGATGCTGGAGTTAAGATGGCTGTTGTGTCCAATTTCGACTCTCGCTTAAGGAAGCTATTGAAGGATCTTAACGTTTTACATCTATTTGATGCAGTCATTATATCATCAGAGGTTGGATATGAAAAACCAGACCCCAAAATATTTCAAGCTGCTCTAGGTCAATTAAATGTAGTGGCTGGCAAAGCCTTACACATAGGAGATGATCAAAAGGCAGATAAATTTGGGGCCAATGCTGTAGGAATAGATTGCTGGTTATGGGGCACTGATGTGAAGACATTCTCTGAGATACAAATCCGCATCCTTAACCCAGAAGCATAA 831 0.4368 MGTSSNTVMMRCSPSNSLFKALKPNFRNSNLVPNSSLPLSSSTQINKGASRCSHSHGGGTGRAYDALLLDAGGTLLQLANPVEDTYATIGSKYGLAVNPAEIKQGFKRAFSAQWSEKLRYQGDGRPFWKFVVSEATGCGDEDFFEEVYEYYAKGDAWHLPNGAFDTMTLLKDAGVKMAVVSNFDSRLRKLLKDLNVLHLFDAVIISSEVGYEKPDPKIFQAALGQLNVVAGKALHIGDDQKADKFGANAVGIDCWLWGTDVKTFSEIQIRILNPEA 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01853 276 NCBIfam HAD-IA family hydrolase 170 251 IPR006439 -
Mepo5g01853 276 CDD HAD_dREG-2_like 163 273 - -
Mepo5g01853 276 NCBIfam HAD hydrolase, REG-2-like, family IA 67 256 IPR011949 -
Mepo5g01853 276 SUPERFAMILY HAD-like 64 263 IPR036412 -
Mepo5g01853 276 Pfam Haloacid dehalogenase-like hydrolase 141 254 IPR041492 -
Mepo5g01853 276 Gene3D - 68 258 IPR023214 -
Mepo5g01853 276 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 64 75 IPR006439 -
Mepo5g01853 276 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 200 216 IPR006439 -
Mepo5g01853 276 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 170 183 IPR006439 -
Mepo5g01853 276 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 218 238 IPR006439 -
Mepo5g01853 276 Gene3D - 80 152 IPR044924 -
Mepo5g01853 276 PANTHER - 11 273 - -
Mepo5g01853 276 SFLD Haloacid Dehalogenase 64 259 - -
Mepo5g01853 276 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 64 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01853 Mepo-Chr5 20325388 20330888 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01853 - - tpra:123911032 417.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01853 5 20325388 20330888 Mepo5g01853 5 20325388 20330888 ECH