Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01825 ATGAATTCTGATGGTGATGGTTACGCCGTTGAAGTCACTGGTCTTTCACCTGAAGCCACTGATAAAGATGTTTATGAATTTTTCGCATTCTCTGGTGCTATTCAACATGTTGAAATTATCAGGTCTGGTGATTATGCTTGCACTGCTTATGTGACCTTCAAAGATGCGTATTCTCAAGACACTGCATGTTTACTCAGTGGAGCCACTATTTTAGATCAACGTGTCTGCATAACTCGCTGGGGGCAGTATGAAGAACATGATTTTTGGAGCAGGCCCTCCTATAGCCATGAGGAGGAGAATGCTTATACTACACAACATCAGACTCAACATAGCAGTCAATTTGTTTCCTCTGCTGGAGAAGCAGTTGCTATGACTCAAGAAGTCGTTAAGACCATGCTAGCAAAGGGATATGTCCTTAGTAAGGATGCATTATCTAAGGCTAAAGACTTTGACGAATCACATCGGGTTTCTGCCACTGCAACAGCCAAGGTTTCTGAATTGAGCCAGAAAATCGGCCTCACTGATAAGCTATCTGCTGGTTATGAAGTTGTTAAGTCTGTCGATCAGAAGTATAATGTCTCTGGAACAACAATAGCAGCTGCATCCGCTACCGGAAGAACAGTAGCAGCAGCTGCAAACTCAGTGGTAAATAGTAGCTATTTTTCAAAGGGAGCCTTGTGGATGTCTGGTGCTCTAACCCGAGCCGCTCAAGCTGCATCTGATTTGGGTAACCGCGGTACTAAGCAGTGA 750 0.44 MNSDGDGYAVEVTGLSPEATDKDVYEFFAFSGAIQHVEIIRSGDYACTAYVTFKDAYSQDTACLLSGATILDQRVCITRWGQYEEHDFWSRPSYSHEEENAYTTQHQTQHSSQFVSSAGEAVAMTQEVVKTMLAKGYVLSKDALSKAKDFDESHRVSATATAKVSELSQKIGLTDKLSAGYEVVKSVDQKYNVSGTTIAAASATGRTVAAAANSVVNSSYFSKGALWMSGALTRAAQAASDLGNRGTKQ 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01825 249 SUPERFAMILY RNA-binding domain, RBD 4 86 IPR035979 GO:0003676
Mepo5g01825 249 Gene3D - 2 87 IPR012677 -
Mepo5g01825 249 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 82 IPR000504 GO:0003723
Mepo5g01825 249 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 9 245 - -
Mepo5g01825 249 SMART rrm1_1 9 79 IPR000504 GO:0003723
Mepo5g01825 249 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 12 72 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01825 Mepo-Chr5 19809677 19813536 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01825 - - gsj:114378905 360.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01825 5 19809677 19813536 Mepo5g01825 5 19809677 19813536 ECH