Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01698 ATGGCTATCACCACCCCCACCAAACCAAAACTTATCCTCTCACTCCTCCAACCTCACCACCACACTTTCTCTCTCTTCCAAACTCCAACAACTTTCTCATTCTCTTTCTCTCTCCTCCCCAACCGCTCTCTCAAATTCCCTCTCTCTTTCTCATTCAAATCCCCACCCTCACCAATCCGCAACTTCAATGCCGACGAAGACGACGACGAAGAAGAGGAAATCGACGACGACGAAGATGAAGAAGAAGAAGATATCGCGGCTGATGAATACGATGAAGTCGTTGTATCCGGTGAGGCTTCGGATGAAGATGAAGTTGAGGTGGAGGAATTGGCGAGATATGATGATGGATTTAAGTGGCAGAGAGTTGAGAAGCTTTGTAATGAAGTTAGAGAGTTTGGTGTTGGGATTATTGATGTGGATGAACTTGCTTCTGTTTATGATTTTCGGATTGATAAGTTTCAGCGGCAAGCGATTCAAGCTTTTCTGAGAGGTTCATCGGTGGTGGTTTCTGCTCCGACGAGTAGTGGGAAGACTTTGATTGCGGAGGCTGCGGCGGTTGCTACTGTGGCTAGGGGACGAAGATTATTCTACACGACTCCTCTTAAAGCGTTGTCTAATCAGAAGTTTCGTGAATTCCGGGAGACTTTTGGTGACAGCAATGTTGGCCTTCTTACGGGTGATTCTGCTGTCAACAAGGATGCTCAGGTTTTGATTATGACTACGGAGATATTACGCAACATGTTGTATCAGAGTGTTGGTAATGTTTCTTCTGGAAGTGGACTTGTCAATGTTGATGTGATTGTCTTGGACGAAGTTCATTACCTTAGTGACATATCTCGCGGTACAGTTTGGGAAGAAATTGTTATCTATTGCCCAAAAGCAGTTCAACTTATTTGTCTCTCTGCAACCGTTGCAAATCCAGATGAGTTGGCTGGTTGGATTGGTCAGATTCATGGTGGAACAGAGTTGGTAACATCTTCAAAACGCCCAGTTCCTCTAAATTGGCATTTCTCTTTGAAGAATTCCTTATTACCACTTCTTGATGATAAAGGAACACAGATGAACAGGAAGCTGTCACTCAATTATTTAAAACTTCAAGCTGCAGAAGCTAAACCTTACAAGGATGATTGGCCTAGAAAAAGGAATTCCCGGAAACGTGGAACTCGCACAAGCTATGACAACGATGATAGAATGTTGGAACAGCGTTCTCTTTCGAAGAATGACATAAATGCAATTCGTCGATCACAAGTTCCTCAAATAATCGATACTTTATGGCACCTTCAGTCAAGGGATATGCTTCCAGCTGTTTGGTTTATTTTTAGCAGGAAGGGTTGTGATGCAGCTGTGCAATATGTTGAAGATTGCAAACTTTTAGACGAGTGTGAAGCAAGTGAGGTTCAACTAGCTTTGAAAAGGTTCCGCATTCAGTATCCAGATGCTGTCAGAGAAACAGCTGTGAAAGGGCTTTTGCAAGGGGTTGCTGCACATCATGCTGGATGTCTACCACTGTGGAAGGCCTTCATAGAAGAGTTGTTTCAAAGAGGTCTTGTCAAGGTTGTTTTTGCTACCGAAACCCTTGCTGCCGGAATCAACATGCCTGCTAGAACAGCTGTTATTTCATCCCTCAGCAAAAGAAGTGATACTGGGCGCACCTTGTTGACCTCAAATGAACTGCTTCAGATGGCTGGGCGTGCTGGGCGTAGAGGCATTGATGAAATTGGTCATGTAGTCCTCGTCCAAACTCCTAATGAAGGTGCTGAAGAGTGCTGCAAGGTACTTTTTTCTGGACTTGAGCCTCTGGTGTCGCAGTTTACTGCTTCTTATGGAATGGTTTTGAATCTTCTTGGTGGTGGGAAAGCCCTTCGTAGGTCAAACACATCGGACGAGATGAAAACTTCACCAGGGAAAACTTTGGATGAAGCTAGGAAGTTAATTGAGCAAAGTTTTGGAAATTATGTCAGTAGCAGTGTTATGCTGGCTGCTAAAGAGGAACTTAATAGAATTGAAAAAGAAATTCAGCTGTTGATGTCAGAAATCACTGATGAAGCCATAGATAGAAAAAGTAGGAAGGCTTTATCACAGCGACAATACAAGGAGATTGCAGAATTACAGGAAAATTTAAGGGCAGAGAAACGTATTAGGGCTGAATTGCGAAGACAGAAGGAAGCAAAGAGAATATCTGCCTTGAAACCATTATTAGAAGAGTCCGAAAATTTACCATTTTTGTGCTTGCAGTATAGAGATTCTGACGGAGTTCAACATTCAATTCCTGCTGTGTTTTTGGGAAAGGTCGACTCCCTTGGTGCTTCGAAACTCAAAAACATGATCGGTTCTGTCGATTCTTTTGCACTAAATTCAGCAGATGCAGATTCTGAATTGAATGAAGATCCTGTATCATCATATCACGTAGCTCTTGGCTCAGATAACTCTTGGTATCTATTTACAGAAAAGTGGATTAAAACAGTATATGAGACAGGCTTTCCCGATGTTCCGTTAGTTCAAGGGGATACCCGACCTCGAGAAATTATGAGTGATCTCCTTGATAAGGAGGACATGAAGTGGGATAACCTTGCTAACTCTGAACACGGTGGTTTATGGGTCACGGAAGGATCTCTGGAGACATGGTCTTGGAGCTTGAACGTTCCAGTTTTGAGTAGCTTCTCTGAAAATGAAGAGGTGCTACTGAAGTCTCAAGCATACAGAGATGCAGCTGAACAATACAAAGACCAAAGAAGTAAAGTTGCACGTTTGAAAAAGAAGATATCTCGTACTGAAGGCTATAAAGAATATAATAAAATTCTAGACGCAGTCAAGTTTATCGAGGAGAAAATCAAGCGGATGAAGACTAGATCCAAACGTCTGACTAATCGGATAGAACAAATTGAACCCTCAGGTTGGAAGGAGTTTATGCAGGTGAGCAATGTCATACGTGAAACCAGAGCTTTAGATATCAATACACATGTGATATATCCACTAGGGGAAACTGCTTCAGCAATTCGTGGAGAAAATGAGCTATGGCTCGCAATGGTTCTTCGTAGTAAAATTTTAGTAGAACTAAAACCTGCACAACTTGCTGCAGTGTGTGCAGGTTTGGTATCCGAGGGGATTAAAGTCAGACCCTGGAAGAACAACAATTACATTTTTGAGCCTTCTGCAACGGTAGTCAATATCATAGGGTTATTGGATGAGCAAAGAAATGCCCTATTGACAATTCAGGAGAAACACGGGGTGACAATATCTTGCTGTTTGGATAGCCAGTTTTGTGGTATGGTTGAAGCTTGGGCTTCTGGGTTGACATGGAGAGAAATAATGATGGATTGTGCAATGGATGATGGTGATCTAGCTCGTCTCCTTCGAAGGACTATTGATCTATTAGCTCAGATTCCTAAATTGCCAGATATTGATCCATTGTTGCAAAAGAATGCAAGGGCTGCTTATGATGTCATGGATCGGCCTCCAATAAGTGAACTTGCTGGGTAG 3480 0.4264 MAITTPTKPKLILSLLQPHHHTFSLFQTPTTFSFSFSLLPNRSLKFPLSFSFKSPPSPIRNFNADEDDDEEEEIDDDEDEEEEDIAADEYDEVVVSGEASDEDEVEVEELARYDDGFKWQRVEKLCNEVREFGVGIIDVDELASVYDFRIDKFQRQAIQAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARGRRLFYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAVNKDAQVLIMTTEILRNMLYQSVGNVSSGSGLVNVDVIVLDEVHYLSDISRGTVWEEIVIYCPKAVQLICLSATVANPDELAGWIGQIHGGTELVTSSKRPVPLNWHFSLKNSLLPLLDDKGTQMNRKLSLNYLKLQAAEAKPYKDDWPRKRNSRKRGTRTSYDNDDRMLEQRSLSKNDINAIRRSQVPQIIDTLWHLQSRDMLPAVWFIFSRKGCDAAVQYVEDCKLLDECEASEVQLALKRFRIQYPDAVRETAVKGLLQGVAAHHAGCLPLWKAFIEELFQRGLVKVVFATETLAAGINMPARTAVISSLSKRSDTGRTLLTSNELLQMAGRAGRRGIDEIGHVVLVQTPNEGAEECCKVLFSGLEPLVSQFTASYGMVLNLLGGGKALRRSNTSDEMKTSPGKTLDEARKLIEQSFGNYVSSSVMLAAKEELNRIEKEIQLLMSEITDEAIDRKSRKALSQRQYKEIAELQENLRAEKRIRAELRRQKEAKRISALKPLLEESENLPFLCLQYRDSDGVQHSIPAVFLGKVDSLGASKLKNMIGSVDSFALNSADADSELNEDPVSSYHVALGSDNSWYLFTEKWIKTVYETGFPDVPLVQGDTRPREIMSDLLDKEDMKWDNLANSEHGGLWVTEGSLETWSWSLNVPVLSSFSENEEVLLKSQAYRDAAEQYKDQRSKVARLKKKISRTEGYKEYNKILDAVKFIEEKIKRMKTRSKRLTNRIEQIEPSGWKEFMQVSNVIRETRALDINTHVIYPLGETASAIRGENELWLAMVLRSKILVELKPAQLAAVCAGLVSEGIKVRPWKNNNYIFEPSATVVNIIGLLDEQRNALLTIQEKHGVTISCCLDSQFCGMVEAWASGLTWREIMMDCAMDDGDLARLLRRTIDLLAQIPKLPDIDPLLQKNARAAYDVMDRPPISELAG 1159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01698 1159 SMART DSHCT_2 984 1158 IPR012961 -
Mepo5g01698 1159 SMART helicmild6 483 569 IPR001650 -
Mepo5g01698 1159 CDD SF2_C_Ski2 399 581 - -
Mepo5g01698 1159 FunFam DExH-box ATP-dependent RNA helicase DExH15 chloroplastic 941 1151 - -
Mepo5g01698 1159 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 583 IPR027417 -
Mepo5g01698 1159 Gene3D - 111 329 IPR027417 -
Mepo5g01698 1159 Gene3D - 896 1151 - -
Mepo5g01698 1159 MobiDBLite consensus disorder prediction 374 397 - -
Mepo5g01698 1159 Coils Coil 930 957 - -
Mepo5g01698 1159 FunFam ATP-dependent RNA helicase 114 329 - -
Mepo5g01698 1159 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 158 322 IPR014001 -
Mepo5g01698 1159 PANTHER ATP-DEPENDENT RNA AND DNA HELICASE 93 1153 - -
Mepo5g01698 1159 Coils Coil 658 678 - -
Mepo5g01698 1159 Coils Coil 900 920 - -
Mepo5g01698 1159 MobiDBLite consensus disorder prediction 64 86 - -
Mepo5g01698 1159 SMART ultradead3 146 336 IPR014001 -
Mepo5g01698 1159 Coils Coil 693 720 - -
Mepo5g01698 1159 Pfam DSHCT (NUC185) domain 988 1154 IPR012961 -
Mepo5g01698 1159 Pfam DEAD/DEAH box helicase 153 305 IPR011545 GO:0003676|GO:0005524
Mepo5g01698 1159 Gene3D - 330 600 IPR027417 -
Mepo5g01698 1159 MobiDBLite consensus disorder prediction 57 86 - -
Mepo5g01698 1159 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 416 615 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01698 Mepo-Chr5 18183881 18192150 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01698 K26077 - gmx:100780908 1783.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01698 5 18183881 18192150 Mepo5g01698 5 18183881 18192150 ECH