Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01695 ATGAATATGATAACTAAAAAAATGAAAACCCAAATCTATTTTCACACCCTTCCACTATTACTATTCACATTCTCTCTCTTTTTAGGCCAATGCATATCTGACCCTGACCCACTTCAAGATTATTGCATTGCAGATAACAAAAACACATTTTTCATAAATGGTTTACCATGCATTGATCCAAAACAAGCTACTTCATCTCATTTTTCAACATCTTCATTATCAAAACCTGGTAACACAACAAACATGTTTGGTTTTAATGTCACACCAACAACCACTATTAACCTACCTGGGCTTAACACATTGGGCCTAGTTTTAGTTCGTGTCGATATAGCTGGAAATGGGATTGTACCCCCACATTCTCATCCACGGGCCTCAGAAGTTACAACATGTATTAAAGGGCTTTTACTTGTGGGCTTTGTTGATACATCAAATCGTGCATTTACTCAAAATTTGAACCCAGGTGAATCATTTGTGTTTCCTAAGGGACTTGTGCATTTTTTGTATAATCGTGACTCTAAGCAACCAGCAATTGCAATTTCTGGTCTTAATAGTCAGAATCCAGGTGCACAAATTGCATCAATTGCAACATTTGCTAGTAAACCTTCTATTCCTGATGAAGTAATTAAGAAGGCTTTTCAAATGAGTGGTCAAGATGTGGAAATTATTAGGAAGAAACTTGGTGGTTGA 687 0.3639 MNMITKKMKTQIYFHTLPLLLFTFSLFLGQCISDPDPLQDYCIADNKNTFFINGLPCIDPKQATSSHFSTSSLSKPGNTTNMFGFNVTPTTTINLPGLNTLGLVLVRVDIAGNGIVPPHSHPRASEVTTCIKGLLLVGFVDTSNRAFTQNLNPGESFVFPKGLVHFLYNRDSKQPAIAISGLNSQNPGAQIASIATFASKPSIPDEVIKKAFQMSGQDVEIIRKKLGG 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01695 228 CDD cupin_OxOx 34 226 IPR001929 GO:0030145
Mepo5g01695 228 ProSitePatterns Germin family signature. 114 127 IPR019780 GO:0030145
Mepo5g01695 228 Gene3D Jelly Rolls 33 228 IPR014710 -
Mepo5g01695 228 SUPERFAMILY RmlC-like cupins 34 224 IPR011051 -
Mepo5g01695 228 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 31 222 - -
Mepo5g01695 228 FunFam germin-like protein subfamily 2 member 1 33 228 - -
Mepo5g01695 228 SMART Cupin_1_3 71 220 IPR006045 -
Mepo5g01695 228 PRINTS Germin signature 149 169 IPR001929 GO:0030145
Mepo5g01695 228 PRINTS Germin signature 119 139 IPR001929 GO:0030145
Mepo5g01695 228 PRINTS Germin signature 183 198 IPR001929 GO:0030145
Mepo5g01695 228 Pfam Cupin 72 219 IPR006045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01695 Mepo-Chr5 18108809 18110329 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01695 34 227 Miscellaneous Gene Families AT5G39130 44.949 4.78e-53 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01695 - - psat:127119436 380.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01695 5 18108809 18110329 Mepo5g01695 5 18108809 18110329 ECH