Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01679 ATGATGAAGTTATATTCTTATCCACTTGAATTGTTCTTATTCTTTTTCTTTATCATTCTCAATACAACCCTTTCGGCTAATATCCGTCCAACTGGATTCGCTTCTTCTCTTGGCAAACAAGAGACGAAGCCGACCAGTGGCCGAGCTGATGAGGATAAATGGAAGAATGCAATAGACATTATCTCAAACTTGCCTCCGCCGTGTCATACAACTCAGACGTTTCAACTTTCAAAGTACTGGGTGTTGCCAACAGATAACTATCCTTTGTCATATCAGAATGGAGTATTCGATTTGGAGACTGCAGTGATGCATCAGATAGGTCATATACTAGGACTTGATCACTCTTCTGAAGAGGAGTCAGTCATATACCCAACCATATTGCCATCACAACAAATGAAGGTGCAGATAACAGTTTCAGATAACCTAGCAATACAACAAATCTATACCACCACTACCAAAGCCACTGCTGCCAATGCGAACTCTGACAATGATGGGTGCTTCACAATGTTTGGATCCAGTTCTGGTCTCCTTACCTCTTTGTTCCTTGGATTTGCTTTTGTGGTTCTGTTGACCTAA 576 0.4115 MMKLYSYPLELFLFFFFIILNTTLSANIRPTGFASSLGKQETKPTSGRADEDKWKNAIDIISNLPPPCHTTQTFQLSKYWVLPTDNYPLSYQNGVFDLETAVMHQIGHILGLDHSSEEESVIYPTILPSQQMKVQITVSDNLAIQQIYTTTTKATAANANSDNDGCFTMFGSSSGLLTSLFLGFAFVVLLT 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01679 191 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 80 148 - -
Mepo5g01679 191 Gene3D Collagenase (Catalytic Domain) 44 155 IPR024079 GO:0008237
Mepo5g01679 191 PANTHER MATRIX METALLOPROTEINASE 74 149 - -
Mepo5g01679 191 PRINTS Matrixin signature 136 149 IPR021190 GO:0004222|GO:0006508|GO:0008270
Mepo5g01679 191 PRINTS Matrixin signature 101 126 IPR021190 GO:0004222|GO:0006508|GO:0008270
Mepo5g01679 191 Pfam Matrixin 71 148 IPR001818 GO:0004222|GO:0006508|GO:0008270|GO:0031012
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01679 Mepo-Chr5 17982084 17982806 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01679 - - mtr:11411133 125.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01679 5 17982084 17982806 Mepo5g01679 5 17982084 17982806 ECH