Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01666 ATGTCTAATTCTTCGAGGGGTCGAGTTACCATTACTCTTGGACGCAGTGGTCAGGTTGTGAAGAGGGATGTTACTGCGGTGGATGTTCCTTACTCTTCATCTATGTCTTCGGCTGGGACAAAGCGGTCTGTACGAGACAGAATTGGAAATAGTGGAGATAGTTCCATGAGGCATGGAAATGGAGTCAGTGGCAATAAACGACAGCGAGGAGATGTAAGCATGCGAAATGGACCTGACGATGGCCGTATTGGCAAAGATGATCTCCGATTGAAACTCATGCGAAAAAGTGCGTCGAGGAGAGATGAAAGTAATGACAATAACAGGAATGTCGATCTCCGTGAAAAATTGACAAAGACAGCTCACCCTCCGACAAACAGTTTTAATTCAAAGCAGCACATGCCGGAACCAAGGGAAGCAAGCCTGTTCAGGCCAGTTCCTTCAGCTAGAAGTTCTGATGATATAATGCGTATGGATTCCATGAGAAACTCATACTCTCCTTGGACACTGGATCAAATTCGGCAAAGATCACCCGAAGAGTATCCAAGTACTTCCAGGGGGATTTCCCCCCAAAGAAATGCCGGAGACCAGCAGAGAAGGCCATTAAACAGGCCATACGATGGCGTCAGACCAGTTCAATATGCAGGTAGGGATGTTCTTGAAACTTCAAGGCCTCCAAGTGCTGCACCTTCATCTTTCATGCCAAGACCCACGATGTCTACCTTGCCTCCAGTAACCGCCAAGCCTGTACCATCTCATCCTGGCCGACTTCCTCCATCAGGCAGTGTTGCACAAAGGCCTCCATTTGTGGGCAATGAACAGCAACCACAAACTGTTGATGGCTTGTTACAAGTACTGGGATTGCAAAAATATCAAATTCTTTTCAAGGCTGAGGAAGTGGATATGACTGCATTGAGGCAGATGGGAGAAAACGACCTCAAAGAGCTTGGAATTCCTATGGGTCCAAGGAAAAAACTTCTTCTTGCACTCTTGCCTCGTAAGCGTCCACAGTGA 1011 0.4708 MSNSSRGRVTITLGRSGQVVKRDVTAVDVPYSSSMSSAGTKRSVRDRIGNSGDSSMRHGNGVSGNKRQRGDVSMRNGPDDGRIGKDDLRLKLMRKSASRRDESNDNNRNVDLREKLTKTAHPPTNSFNSKQHMPEPREASLFRPVPSARSSDDIMRMDSMRNSYSPWTLDQIRQRSPEEYPSTSRGISPQRNAGDQQRRPLNRPYDGVRPVQYAGRDVLETSRPPSAAPSSFMPRPTMSTLPPVTAKPVPSHPGRLPPSGSVAQRPPFVGNEQQPQTVDGLLQVLGLQKYQILFKAEEVDMTALRQMGENDLKELGIPMGPRKKLLLALLPRKRPQ 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01666 336 Gene3D - 276 336 IPR013761 -
Mepo5g01666 336 ProSiteProfiles SAM domain profile. 273 336 IPR001660 GO:0005515
Mepo5g01666 336 MobiDBLite consensus disorder prediction 157 197 - -
Mepo5g01666 336 PANTHER SCP160 197 333 - -
Mepo5g01666 336 MobiDBLite consensus disorder prediction 241 255 - -
Mepo5g01666 336 SUPERFAMILY SAM/Pointed domain 274 330 IPR013761 -
Mepo5g01666 336 SMART SAM_4 270 335 IPR001660 GO:0005515
Mepo5g01666 336 MobiDBLite consensus disorder prediction 31 274 - -
Mepo5g01666 336 MobiDBLite consensus disorder prediction 31 45 - -
Mepo5g01666 336 MobiDBLite consensus disorder prediction 224 238 - -
Mepo5g01666 336 MobiDBLite consensus disorder prediction 119 133 - -
Mepo5g01666 336 MobiDBLite consensus disorder prediction 53 70 - -
Mepo5g01666 336 MobiDBLite consensus disorder prediction 72 118 - -
Mepo5g01666 336 Pfam SAM domain (Sterile alpha motif) 274 329 IPR001660 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01666 Mepo-Chr5 17786211 17793240 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01666 271 329 Glycosyltransferase AT3G07170 55.932 1.44e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01666 - - gmx:100797199 447.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01666 5 17786211 17793240 Mepo5g01666 5 17786211 17793240 ECH