LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo5g01613	ATGAATCCTTTCTCTTCAGGAACGCGTTTGAGGGACATGATTCGGGCCATACGTGCATGCAAGACTGCAGCAGAAGAGCGTGGCGTTGTAAGAAAAGAATGCGCAGCCATCCGTGCTTCAATAAATGAAAACGACCAAGATTACAGGCATCGTAATATGGCTAAGCTAATGTTCATCCACATGCTTGGATACCCAACACATTTTGGTCAAATGGAGTGCCTCAAGTTGATAGCGTCCCCTGGATTTCCGGAGAAGAGAATAGGCTATCTTGGCCTCATGTTGCTTCTTGATGAAAGACAAGAAGTTCTAATGTTGGTCACCAATTCTTTGAAACAAGATCTTAATCATACAAATCAGTATATAGTGGGACTTGCACTCTGTGCTTTAGGAAACATTTGTTCAGCAGAAATGGCTCGTGATCTTGCACCAGAGGTTGAGAGGTTGCTACAATTTCGTGATCCCAATATTCGGAAGAAGGCAGCATTGTGCTCTATAAGGATCATAAAGAAAGTTCCAGATTTGGCAGAAAATTTTATCAATCCTGCTACTTCCTTACTTAGGGAGAAACACCATGGAGTTTTAATTACTGGAGTTCAGCTTTGTACAGATCTGTGTAAAACTAGCACAGAAGCTCTTGAACATATTAGGAAGAAATGCACAGATGGTTTGGTCAGAACTCTCAAAGATCTAGCAAACAGTCCTTATTCACCAGAATATGATATTGCTGGCATCACAGATCCATTTCTCCACATCAGGTTGCTTAAACTTTTGCGAGTGTTAGGTGAAGGTGATGCTGATGCTAGTGACTCTATGAATGACATACTTGCCCAGGTGGCTACAAAAACCGAGTCAAATAAAGTTGCAGGGAATGCCATTTTATATGAGTGTGTTCAAACAATAATGAGTATTGAAGATAACGGTGGCTTACGCGTACTTGCCATCAATATCCTGGGAAGATTCTTGTCAAACCGCGACAACAATATCAGATACGTGGCATTAAATATGCTAATGAGGGCTGTAACTGCTGATGCTCAGGCAGTGCAGAGGCACCGTGCAACAATTCTAGAATGTGTGAAGGATTTAGACGCTTCAATTCGGAAAAGAGCCCTTGAACTTGTATATGTTCTGGTAAATGAAACTAATGTGAAGCCTTTAGTGAAAGATCTTGTAGATTATCTGGAAGTCAGTGATCTTGATTTCAGAGGGGACCTAACTACCAAAATATGCTCCATAGTTGCAAAGTTTTCCCCAGAGAAGATCTGGTACATTGATCAGATGCTAAAGGTTCTGACTGAGGCTGGAAATTTTGTAAAAGATGAAGTGTGGTATGCCTTAATTGTTGTGATAAGCAATGCTTCCGAGCTTCATGGATATTCAGTAAGAGCATTATACAGGGCATTTCAAACGTCTGCTGAACAGGAGACTCTAGTTCGAGTTACAGTGTGGTGCATTGGTGAGTATGGTGACATGTTGGTCAATAATGTTGGAATGCTTGACATAGAAGATCCAATAACAGTGACTGAGTCAGATGCAGTCGATGTTGTAGAGATTGCTATAAAACGCCATGCATCAGATCTTACCACAAAAGCAATGGCTTTGGTTGCCTTATTAAAGCTCTCTTCACGTTTCCCTTCTTGTTCAGAGAGGATCGGGGAAATTATTGTACAGTTCAAAGGGAACCTTGTGCTAGAATTGCAGCAGAGAGCTATTGAATTCAATTCGATTATTGCTAAGCACCAAAATATTAGATCTACTCTTGTAGAAAGGATGCCAATTTTGGATGAGGCCACTTTCATAGGTAGGAGGGCTGGGTCTTTACCAGGTGCCGCTTCTACAGCAACTGCACCTTCAGTCAGTCTCCCGAATGGGGTAGCTAAACCTGCAGCTCCTCTTGTAGATCTACTTGATCTAAGTTCAGATGATGCTCCAGCACCTAGCTCTTCTGGTGGCGATTTTCTTCAGGACCTTCTTGGTGTTGATCTGTCACCAGCATCACAGCAATACGGTGTCGGTCAAGCATCACAAAGTGGCACAGATGCTCTTATGGATCTTTTGTCGATTGGATCGCCTTCTGCCCCGAGCAGCTCATCTACAGTAGACATCTTGTCCTTAAGTGCTAGTAATATAGCACCTGCTTCATCATTGGATGATCTCTCACCACATCCACCTTCTTCAAGAGCTACTTCAAATGCTGGTTCAATGATGGATTTATTGGGTGGTATTTCCTCCAGCTCGGCAACAGAAAACAATGGACCAGTTTACCCATCTGTAACTGCTTTTGAGAGCAGCTCCTTGAGGTTGACATTCAATTTCTCAAAACAACCAGGAAACCCACAAACAACAGTTATCCAGGCTACCTTTACAAATTTGTCCTCCAATACATATACAGATTTTGTTTTCCAGGCTGCAGTCCCCAAGTTTCTACAATTGCACTTGGATCCAGCTAGCGGCAATACTCTCCCTGCTGCTGGAAATGGGTCAGTCACGCAAACTTTGAGAGTTACTAATAGCCAACATGGAAAGAAATCTCTTGTCATGCGCATAAGGATAGCATACAAGGTAAATGGCAAAGATACACTGGAGGAAGGACAAATCAGTAATTTTCCTAAGGGTCTGTGA	2619	0.4234	MNPFSSGTRLRDMIRAIRACKTAAEERGVVRKECAAIRASINENDQDYRHRNMAKLMFIHMLGYPTHFGQMECLKLIASPGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHTNQYIVGLALCALGNICSAEMARDLAPEVERLLQFRDPNIRKKAALCSIRIIKKVPDLAENFINPATSLLREKHHGVLITGVQLCTDLCKTSTEALEHIRKKCTDGLVRTLKDLANSPYSPEYDIAGITDPFLHIRLLKLLRVLGEGDADASDSMNDILAQVATKTESNKVAGNAILYECVQTIMSIEDNGGLRVLAINILGRFLSNRDNNIRYVALNMLMRAVTADAQAVQRHRATILECVKDLDASIRKRALELVYVLVNETNVKPLVKDLVDYLEVSDLDFRGDLTTKICSIVAKFSPEKIWYIDQMLKVLTEAGNFVKDEVWYALIVVISNASELHGYSVRALYRAFQTSAEQETLVRVTVWCIGEYGDMLVNNVGMLDIEDPITVTESDAVDVVEIAIKRHASDLTTKAMALVALLKLSSRFPSCSERIGEIIVQFKGNLVLELQQRAIEFNSIIAKHQNIRSTLVERMPILDEATFIGRRAGSLPGAASTATAPSVSLPNGVAKPAAPLVDLLDLSSDDAPAPSSSGGDFLQDLLGVDLSPASQQYGVGQASQSGTDALMDLLSIGSPSAPSSSSTVDILSLSASNIAPASSLDDLSPHPPSSRATSNAGSMMDLLGGISSSSATENNGPVYPSVTAFESSSLRLTFNFSKQPGNPQTTVIQATFTNLSSNTYTDFVFQAAVPKFLQLHLDPASGNTLPAAGNGSVTQTLRVTNSQHGKKSLVMRIRIAYKVNGKDTLEEGQISNFPKGL	872

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo5g01613	872	SUPERFAMILY	Clathrin adaptor appendage domain	728	870	IPR013041	-
	Mepo5g01613	872	SUPERFAMILY	ARM repeat	25	591	IPR016024	-
	Mepo5g01613	872	Gene3D	-	2	594	IPR011989	-
	Mepo5g01613	872	FunFam	AP-1 complex subunit gamma	2	594	-	-
	Mepo5g01613	872	Gene3D	-	738	871	-	-
	Mepo5g01613	872	FunFam	AP-1 complex subunit gamma	743	872	-	-
	Mepo5g01613	872	SMART	alpha_adaptinc2	749	869	IPR008152	GO:0006886\|GO:0016192
	Mepo5g01613	872	PIRSF	AP1_gamma	6	872	IPR017107	GO:0005794\|GO:0016192\|GO:0030121
	Mepo5g01613	872	Pfam	Adaptin N terminal region	27	578	IPR002553	GO:0006886\|GO:0016192\|GO:0030117
	Mepo5g01613	872	MobiDBLite	consensus disorder prediction	712	734	-	-
	Mepo5g01613	872	PANTHER	ADAPTIN, ALPHA/GAMMA/EPSILON	11	860	-	-
	Mepo5g01613	872	ProSiteProfiles	Gamma-adaptin ear (GAE) domain profile.	752	869	IPR008153	-
	Mepo5g01613	872	Pfam	Adaptin C-terminal domain	755	869	IPR008152	GO:0006886\|GO:0016192

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo5g01613	Mepo-Chr5	17105373	17119825	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo5g01613	K12391		-	gmx:100802164	1499.57

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mepo5g01613	5	17105373	17119825	Mepo5g01613	5	17105373	17119825	ECH