Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01595 ATGGTTCGTCCTGTATATCCTCCACGCCTTCCTGGAGCAATCAATGTGCTTCCAGTATCACGCCCGCCTGTTGCAGGGATCCCTTCAATACGCCCTATTATTCCTCCTGTTGTCAGACCTGTGGTTCCTCCTAGTGTTACTCCAGCTGAGAAGCAACATACCACTGTTTACATTGGCAAGATTGCACCAACCGTGGAGAATGAGTTCATGCTCTCTCTCCTTAAATTGTGTGGGAATATCAAGAGCTGGAAAAGACCTCAGGATTTATCAAGTGGGACGCCTAAAAGTTTTGGGTTTTATGAGTTTGATACTGCTGAAGGGGTCCTCCGTGCTTTACGTCTCCTTACCAAATTGAATATTGATGGCCAAGAATTAGTGATCAATGTAGATGAAGCTATGAGAAACTATCTGGAGCGGTATGTACAAAAGAAAACTGAGAATTCAAAGGAAAAGGAAACTCAGGCAGCAGAAGTTGGAAAAGATCAAGCTGTGAAAACTTCTGATGTAAAGGAGGATGCAAAGCCTGATGTGGAGCACTCAAATAAGGAGGGTAATGATTCAGCGAACAAGAAAACTCATGATGTGGCAACTTTTGGGATTGTTACGGATGAAGATAGGGAAGTTGATCGCGATGCTTTAGAAAAAATCAAGCAGATGATAGAGGAGAGGCTGAACTCAAGACCTTTGCCTCCACCACCTCCACCGCCAACTGGTGATGGTTCTGTGGATTCAACTTCTGAACAACCTACTAAAACAAGAGAAGGAGACTCTGATGTGGATACAAAGAAGAATGAAACGGCTGAAGAGAAAAATGAGAGAGAGACAAACAGTGATAAGAAACCAACCAGTGAACATGATAGACCTGAAACCCCTGATAGAAGGCATGACAGGAAAAGCAGGGAGAGAGACAGGGAACGGGAACTGAAACGAGAAAAGGAAAGAGACCTTGAGAGATATGAAAGAGAAGCTGAGCGGGAACGTATTCGGAAAGAGAGGGACCAAAAACGGAGGATTGAGGAAGTTGAGCGTCAGTTTGAATTACAATTGAAGGAATGGGAGTATAGAGAAAGAGAGAAAGAAAAAGAACGTCAATATGAAAAAGAGAAGGAGAAGGACAGAGAACGCAAGCGGAGAAAGGAAATACTTTACGATGAAGAGGATGATGATGGGGATTCTAGGAAGAGGTGGCGTAGAAATGCGATAGAGGAGAAGAGAAAGAAGAGGCTGCGAGAAAAGGAAGATGACCTGGCTGACAGACAAAAAGAAGAGGAGGAAATTGCTGAGGCCAAGAAGAGAACTGAGGAGGATCAACAATTGAAGCGGCAGAGAGATGCATTGAAGCTGTTGACAGAGCATATTGTAAATGGCAGGGACGAAACTATGGCTACCAGAGAGATTACTTATGAAATGAACAATATTGTTGCTGTACAAGATACTGTAGCTGATTCTAATCATGAAGGTGATGCTAATGTACTAAATACTACCAATGATGAATCCACCATGGCATCCATAGCCACAACTGATACTCAGTCAAGTGGAAATGCTCCTTTGAAGAAGTTGGGATTTGGTCTGGTTGGCTCTGGAAAAAGAACAACTGTCCCTTCTGTTTTCCATGAAGATGAAGACGATGATGCACACAAAGATAAAAAATTGAGGCCTTTGGTTCCAATTGATTACTCGACAGAAGAGTTGCAGGCTGTTGAACCTGCTCCTTCTGGGCCAACACCGCCCAATTTGGCTGCAGCTGCAGAGTTTGCAAAACGTATATCTAGTACCAATTTCAAGGAAGAGAGGCTGGATGGAGAACGGGATAGAAGTAGGCATTCGAATGAGAAGTCCAACCACCGGGACAGGGATAGGAGTGATGAAGACGGCACTAATCACAGAGATGAACACAGGGAGAGAAATTCTGACCGTGACAGGGATCGAGATCATGGGTTGGAGAAAAACAAGACTTATGATAACAGCAGGAGGCTCTTGGATGCAAAACAGTTGATTGATATGATACCAAAGACCAAGGAGGAGTTGTTCTCATATGAGATAGACTGGGCAGCATACGACAAGCATCAATTACATGAAAGAATGAGACCGTGGATTTCAAAGAAAATTAAAGAGTTTTTAGGGGAAGAAGAAAATACATTGACAGATTATATTGTCTCAAGTACACAAGAACACGTGCAAGCATCGCAAATGCTAGAGCGTCTTCAGGTCATTTTAGATGAAGAGGCTGAAATGTTTGTTCTCAAGATGTGGAGGATGCTTATCTTTGAAATAAAGAAGGTAGAGACAGGGCTTGCTTCGAAGTCCAAATCATGA 2316 0.4313 MVRPVYPPRLPGAINVLPVSRPPVAGIPSIRPIIPPVVRPVVPPSVTPAEKQHTTVYIGKIAPTVENEFMLSLLKLCGNIKSWKRPQDLSSGTPKSFGFYEFDTAEGVLRALRLLTKLNIDGQELVINVDEAMRNYLERYVQKKTENSKEKETQAAEVGKDQAVKTSDVKEDAKPDVEHSNKEGNDSANKKTHDVATFGIVTDEDREVDRDALEKIKQMIEERLNSRPLPPPPPPPTGDGSVDSTSEQPTKTREGDSDVDTKKNETAEEKNERETNSDKKPTSEHDRPETPDRRHDRKSRERDRERELKREKERDLERYEREAERERIRKERDQKRRIEEVERQFELQLKEWEYREREKEKERQYEKEKEKDRERKRRKEILYDEEDDDGDSRKRWRRNAIEEKRKKRLREKEDDLADRQKEEEEIAEAKKRTEEDQQLKRQRDALKLLTEHIVNGRDETMATREITYEMNNIVAVQDTVADSNHEGDANVLNTTNDESTMASIATTDTQSSGNAPLKKLGFGLVGSGKRTTVPSVFHEDEDDDAHKDKKLRPLVPIDYSTEELQAVEPAPSGPTPPNLAAAAEFAKRISSTNFKEERLDGERDRSRHSNEKSNHRDRDRSDEDGTNHRDEHRERNSDRDRDRDHGLEKNKTYDNSRRLLDAKQLIDMIPKTKEELFSYEIDWAAYDKHQLHERMRPWISKKIKEFLGEEENTLTDYIVSSTQEHVQASQMLERLQVILDEEAEMFVLKMWRMLIFEIKKVETGLASKSKS 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01595 771 CDD RRM_RBM25 54 137 IPR034268 -
Mepo5g01595 771 MobiDBLite consensus disorder prediction 221 340 - -
Mepo5g01595 771 SUPERFAMILY PWI domain 692 759 IPR036483 GO:0006397
Mepo5g01595 771 Coils Coil 399 439 - -
Mepo5g01595 771 Coils Coil 355 375 - -
Mepo5g01595 771 FunFam RNA Binding Motif protein homolog 649 766 - -
Mepo5g01595 771 MobiDBLite consensus disorder prediction 356 439 - -
Mepo5g01595 771 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 56 125 IPR000504 GO:0003723
Mepo5g01595 771 Coils Coil 302 351 - -
Mepo5g01595 771 MobiDBLite consensus disorder prediction 144 190 - -
Mepo5g01595 771 ProSiteProfiles PWI domain profile. 674 771 IPR002483 GO:0006397
Mepo5g01595 771 SMART rrm1_1 55 128 IPR000504 GO:0003723
Mepo5g01595 771 MobiDBLite consensus disorder prediction 591 650 - -
Mepo5g01595 771 MobiDBLite consensus disorder prediction 249 340 - -
Mepo5g01595 771 Gene3D PWI domain 650 767 - -
Mepo5g01595 771 SMART pwi_2 687 760 IPR002483 GO:0006397
Mepo5g01595 771 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 54 134 IPR000504 GO:0003723
Mepo5g01595 771 PANTHER SPLICING FACTOR PWI DOMAIN-CONTAINING PROTEIN / RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN 1 771 - -
Mepo5g01595 771 SUPERFAMILY RNA-binding domain, RBD 38 131 IPR035979 GO:0003676
Mepo5g01595 771 MobiDBLite consensus disorder prediction 144 193 - -
Mepo5g01595 771 Gene3D - 46 165 IPR012677 -
Mepo5g01595 771 Pfam PWI domain 694 757 IPR002483 GO:0006397
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01595 Mepo-Chr5 16892679 16897757 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01595 K12822 - gmx:100809428 999.579
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01595 5 16892679 16897757 Mepo5g01595 5 16892679 16897757 ECH