Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01542 ATGTCTTCTTCACCAGAAGCAAAACGCTTAGAAGAAGAACTTTCCTATCCAATTCTCGTCGCCGAACGAATTCGCTCCTCCACAGAAGAAACCGATTCCTTCAAACTCGAATGCTCCGAAGTCTGGAAACACGTCGAACGTCTCCTTCAAATGCTCCGTACACTCGTCCGATTCGCCGCCACCGCTCCTCCGCCGCTTTACGAACGTCCCGTCCGCCGTGTCGCCGCTGAAGCCGCCAAGAATCTTGAACGCGCTTTAACGTTAATTCGTAAGTGTAAACGCCGGAGTATACTTCATCGTGTTGTCACCATCGTCACCGCCGCTGATTTTCGTAAAGTTCTTGTTTATCTTGATGCCTCCGTCGGAGATATGAAGTGGCTTTTAAGTATCCTCGACGTCGACGGCTCCGGCGGCGGAGGAGGTGGTGGAATTAACTTATCCCTTCCACCGATTGCGAGTAATGATCCAATTTTATCATGGGTATGGTCTTTTATAGCTTCAATTCAAATGGGTCAATTGAATGATAAAATTGAAGCTACAAATGAACTTGCTTCATTAGCACAAGATAATGATAGGAATAAGAAGATTATTGTTGAAGAAGGTGGTGTTCCACCTCTCTTGAAGCTTTTGAAAGAAGCTTCTTCCCCTGCCGCGCAAATTGCGGCGGCTACTTGTTTGTGTTATTTGGCTAATGATTTGGAGAGAATTAGGGTTATTGTCAATGAAGTTGGTGTACCTGCTGTTGTTCAGGTTCTTGCTGATTCGCCGATTAGGGTTCAAACGCTAGCGGCTAATTTGGTTGCTAGGATGGCTAGACATGATCCTGTTGCTCAAGAGGATTTCGCGAGGGAGAATGCCATTAGACCGCTTGTTACGCTTTTATCGTTTGATACGGCTGTGGATGAGCAGACGAGTATTCATTCTATTTTTCAGGTTAATAAGGAGTTAGGGAAGAAGACGACAGATAGGTCTGGTACTGGAAGTGGTAGTAGACAGTTTGCAAATTCGTCTTCGAGTACTTATTATTATACCGAGGGGAGTAGCCGTGGAGGGAATTATAGGAAGGAGAGGGAGAATGAGGATCCTGCTGTGAAGCTTCAGCTTAAAATTAGTTGTGCTGAGGCGTTGTGGATGCTTGCGGCAAGGAGTGTATCGAATAGTAGAAAGATAACTGAGACGAAAGGGATGCTTTGTTTGGCTAAGATTGTTGAGAAGGAACAGGGAGAGTTGCAGAGGAATTGTTTGATGACTATAATGGAGATAACGGCTGCGGCAGAATCCAATGCTGATCTTCGACGTGCTGCGTTTAAGACCAACTCACCTCCTGCTAAAGCTGTTGTGGAGCAGCTGTTGAGGATACTTAAAGAGGTTGATAGCCCGTTGATGCAAATTCCGGCGATAAAGTCTATTGGTTCGTTGGCTAGGACATTTCCTGCTAGAGAGACTCGAGTAATTGAACCTCTAGTAGCACAGCTGAGTAATAGAGACATAAATGTAGCAGATGAAGCAGCCGTTGCTCTTACCAAGTTTGCTTCTCCAGAAAACTTCCTATATGTTGAGCATTCTAAGAAAATAATCGAATTTGATGCAGTCCCGGCAGTGATGAAACTGCTGAGGAGTAACGAAGTTACCCAGATGCATCATGCGCTAACTCTCCTTTGCTACCTTGCACTACATGCTGGAAGCAGCGAGTCGTTGGAACAAGCACGGGTGTTATTGGCTCTAGAAGGTGCAGATAGAACAATTCTTCCTCAACATATAAGAGATTTGGTGTCCAAAGCAATTGGTCACCTCAATTTGTATCATGCAGGAAGTCATTCTCAACCATTGGTATATATGCCCTGA 1845 0.4509 MSSSPEAKRLEEELSYPILVAERIRSSTEETDSFKLECSEVWKHVERLLQMLRTLVRFAATAPPPLYERPVRRVAAEAAKNLERALTLIRKCKRRSILHRVVTIVTAADFRKVLVYLDASVGDMKWLLSILDVDGSGGGGGGGINLSLPPIASNDPILSWVWSFIASIQMGQLNDKIEATNELASLAQDNDRNKKIIVEEGGVPPLLKLLKEASSPAAQIAAATCLCYLANDLERIRVIVNEVGVPAVVQVLADSPIRVQTLAANLVARMARHDPVAQEDFARENAIRPLVTLLSFDTAVDEQTSIHSIFQVNKELGKKTTDRSGTGSGSRQFANSSSSTYYYTEGSSRGGNYRKERENEDPAVKLQLKISCAEALWMLAARSVSNSRKITETKGMLCLAKIVEKEQGELQRNCLMTIMEITAAAESNADLRRAAFKTNSPPAKAVVEQLLRILKEVDSPLMQIPAIKSIGSLARTFPARETRVIEPLVAQLSNRDINVADEAAVALTKFASPENFLYVEHSKKIIEFDAVPAVMKLLRSNEVTQMHHALTLLCYLALHAGSSESLEQARVLLALEGADRTILPQHIRDLVSKAIGHLNLYHAGSHSQPLVYMP 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01542 614 Coils Coil 75 95 - -
Mepo5g01542 614 PANTHER ARMADILLO REPEAT ONLY 4 9 602 - -
Mepo5g01542 614 MobiDBLite consensus disorder prediction 317 358 - -
Mepo5g01542 614 Gene3D - 359 433 IPR011989 -
Mepo5g01542 614 Gene3D - 434 598 IPR011989 -
Mepo5g01542 614 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 201 244 IPR000225 GO:0005515
Mepo5g01542 614 Pfam Armadillo/beta-catenin-like repeat 190 230 IPR000225 GO:0005515
Mepo5g01542 614 Gene3D - 12 130 IPR036537 GO:0007166
Mepo5g01542 614 MobiDBLite consensus disorder prediction 322 347 - -
Mepo5g01542 614 Gene3D - 167 334 IPR011989 -
Mepo5g01542 614 SMART arm_5 518 558 IPR000225 GO:0005515
Mepo5g01542 614 SMART arm_5 232 272 IPR000225 GO:0005515
Mepo5g01542 614 SMART arm_5 189 231 IPR000225 GO:0005515
Mepo5g01542 614 SMART arm_5 472 512 IPR000225 GO:0005515
Mepo5g01542 614 SUPERFAMILY ARM repeat 173 572 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01542 Mepo-Chr5 16197949 16200234 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01542 - - gmx:100779659 904.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01542 5 16197949 16200234 Mepo5g01542 5 16197949 16200234 ECH