Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01393 ATGTCTGATTCAAATTCACCACGTGGTGAACATGAACAAGAACAAGAACAAGAACAAAAAGAGAATCAATTGAATTCATCTTCAACGATGACTTCAATTTCTGAAACCCTAGATCCTGCTCAAATGGGTATTTCTTTGGCTGATCTTGACGGTGACGTTGATGTTGATGTTGATGTTGTCGGAGTTTCTGAGCCAGAGGATGCGGGGTTAACCAACGCTGAGATTTTTCCCGTGATGTACACCGGTGATGTTCCGCAGGGAGATGTTGGTGATTTGTCAGATATTTGGCCGGGGCCGATGGATCTTGCTGCGTATGGTCCGGTTAGTTCGTCTCGGGTTTTGGCTGTGCCGCCGGAAGCTTGGTTACCTCCTGATGATGAGAACTGGATATATGATTTTAATGAAGAAGCCTTAAATGATGAAGTTTATGATTCTGATTCTAAAGTTGTGCCATTGATGATTGGAGCTGGGCTTGCCAACCTTGGTAACACATGCTTTCTCAATTCAATTATTCAATGCTTCACGCATACTGTGCCCCTAGTTGAGGGTCTTCTTTTGAGCTGCCATTCTCCTGTTGATCGTCATGATAATGGGTACTGTGTTATCTGTGCTTTCCGCTATCAGATGCAACAGTCCTTGCAGTCTACTGGAAGAGTTATCTCCCCTGTGGTATTTGTGGACAATTTGAAGCAATTTTCTTCTGACTTTAGAAGACATATGCAAGAGGATGCACATGAGTTTATGCAGTGTGCATTGGATAAACTTGAGACATGTTTTTCAAATTTGAAGAAGAATGATCCAGATTTTGAGGAGGATAATATCGTGAAGAAAGTCTTTGGAGGTAGTCTGGTTAGCAAGCTTCGGTGTTGTAACTGTAACCGCTCTTCCGTTACTAATGAGCCATTGATTGACCTGAGTCTAGAAATAGAAAATGTAGATACTATTTCAAGTGCATTGGAGTCTTTCACAATGTTGGAAAACATTGATGCTAAGCTTAAATGTGAGGGCTGCAATGAAGAAGTGTCTGTGGAGAAACAGCTTATGTTGGATCAGACACCTTCAATTGCTGCATTCCATTTAAAGAGGTTTAAGACAGTTGAGAATTCAGTTGAAAAGATTGACAAGCATATCAATTTCCCATTGGAGTTGGATTTGCAACCTTACACCATTTTGAGTGAAAACAATAATGCATCATCGAAATATGATCTATATGCAGTTGTTGTGCATAATGGAGCTTCATCTAACTCTGGGCATTATTTCTGCTTTGTTCGCACTGCTCCAGATACATGGCATAAGTTGGATGATTCAATGGTTACTAAGGTATCTGAAGGGACTGTGCTGTCTCAGGAAGCATACATATTGTTTTATGCCCGACAAGGCACACCTTGGTTTTCAAGTTTTGCGGAATCTACAATTCCATGCTTGAATCTGAGTAGGATGAACAAGTCTCCCAAGTCTGTTTTAGACATCACTGATGGCCAGGATAAATCATTTTCTATTCCAAATGAAAATATTGAAAGGAGTGGGGCCGGTAAATCCAAAGAATTTTCTGAGAAGTCTGATTATTCTTGTCAACAAAGTGGCAAGTTTCCTGAAAATGATGATGTTATTGATGCTTCTCCTTGCCGCGAACAATTTCCTGCTGGGCCATCAAATCAGAAAACTCTTCATTTGAATGGATCGGAAGATATCAGCGCCCAAGTGCAACCTGTGAATTATGCCAGCCCGACTGGCATTGCAAAGCCTGGTAGGAGTTCATATGCTGAGAATGTTGCTCCTGATAAAAACAAATGCAGTCTGGAAGCTAATGATTTTATAGAGAATGATGTTTTCAATGCCTTAACACCTCCCAACTCCCCCCCTTCTCAGACTCCAGGTAAGAGTTTCCAGATCTCACGCGATCAGTTGAAGAAGGAGAAGCAAGGAAGTGGTGGTAAAAGATCATCATCAGGCAAGTCTTCGGATAATCCTCAAAATAAAGCTGCCCGGGCATATGTTAGGAATATGCCTGGTTCAAGGAGAGGTGCATTTTTGGACTTACTTGGCGATTCCTCAGAGAACAAGAGAAAAAAGACTGATTCATCCCAGTCTGGCAAAGACAGCAGCAGTGCTCGCAAGAAATCAGGCCATGCTTCCGTCGGCAGCTACCCTGTGGCAGCCGGAGTTTCACGGTGA 2175 0.4216 MSDSNSPRGEHEQEQEQEQKENQLNSSSTMTSISETLDPAQMGISLADLDGDVDVDVDVVGVSEPEDAGLTNAEIFPVMYTGDVPQGDVGDLSDIWPGPMDLAAYGPVSSSRVLAVPPEAWLPPDDENWIYDFNEEALNDEVYDSDSKVVPLMIGAGLANLGNTCFLNSIIQCFTHTVPLVEGLLLSCHSPVDRHDNGYCVICAFRYQMQQSLQSTGRVISPVVFVDNLKQFSSDFRRHMQEDAHEFMQCALDKLETCFSNLKKNDPDFEEDNIVKKVFGGSLVSKLRCCNCNRSSVTNEPLIDLSLEIENVDTISSALESFTMLENIDAKLKCEGCNEEVSVEKQLMLDQTPSIAAFHLKRFKTVENSVEKIDKHINFPLELDLQPYTILSENNNASSKYDLYAVVVHNGASSNSGHYFCFVRTAPDTWHKLDDSMVTKVSEGTVLSQEAYILFYARQGTPWFSSFAESTIPCLNLSRMNKSPKSVLDITDGQDKSFSIPNENIERSGAGKSKEFSEKSDYSCQQSGKFPENDDVIDASPCREQFPAGPSNQKTLHLNGSEDISAQVQPVNYASPTGIAKPGRSSYAENVAPDKNKCSLEANDFIENDVFNALTPPNSPPSQTPGKSFQISRDQLKKEKQGSGGKRSSSGKSSDNPQNKAARAYVRNMPGSRRGAFLDLLGDSSENKRKKTDSSQSGKDSSSARKKSGHASVGSYPVAAGVSR 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01393 724 MobiDBLite consensus disorder prediction 646 661 - -
Mepo5g01393 724 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 156 459 IPR028889 -
Mepo5g01393 724 MobiDBLite consensus disorder prediction 610 724 - -
Mepo5g01393 724 MobiDBLite consensus disorder prediction 1 19 - -
Mepo5g01393 724 Pfam Ubiquitin carboxyl-terminal hydrolase 157 456 IPR001394 GO:0004843|GO:0016579
Mepo5g01393 724 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 72 459 - -
Mepo5g01393 724 MobiDBLite consensus disorder prediction 1 33 - -
Mepo5g01393 724 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 157 172 IPR018200 GO:0004843|GO:0006511
Mepo5g01393 724 MobiDBLite consensus disorder prediction 485 557 - -
Mepo5g01393 724 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 401 419 IPR018200 GO:0004843|GO:0006511
Mepo5g01393 724 FunFam Ubiquitin carboxyl-terminal hydrolase 20 152 462 - -
Mepo5g01393 724 Gene3D Cysteine proteinases 155 463 - -
Mepo5g01393 724 MobiDBLite consensus disorder prediction 485 506 - -
Mepo5g01393 724 SUPERFAMILY Cysteine proteinases 156 458 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01393 Mepo-Chr5 14470170 14473957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01393 151 458 Miscellaneous Gene Families AT4G31670 34.700 3.49e-49 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01393 K11855 - gmx:100806936 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01393 5 14470170 14473957 Mepo5g01393 5 14470170 14473957 ECH