Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01385 ATGGCAATGAGCAACAACATCATAGGATTCATAAACCTAGTAGCAGTAATCCTCTCAATCCCAATCATTGGTGCTGGAATCTGGCTAACAAACGAACCAGCAGACACATGTGTCAAGTTTCTCCAATGGCCAGTCATAATCCTAGGTGTTCTTCTCTTGGTTGTGTCTCTAGCTGGTCTCATTGGTTCCTTCTGGAGAATCTCATGTCTCTTAATATTCTACCTCGTTGCAATGCTTGTGCTTATTATCTTGCTAGTTTGTTTGGTTATTTTTGTTTACATGGTTACTCTACGTGGTCATGGTATGATTGAACCTAATAGGGCTTATTTGGAATACCGTTTGGATGATTTTTCTGGGTTTTTGAAAAGAAGAGTTAGAAGTTCTTTTAAGTGGGATGCTATTAGAAGATGTCTTAGTGAAACAAATATGTGTGGTGAGTTGAATCAAAGTTTTCGTATGGCTCAGGACTTCTTTAATGCACGTTTAACACCAATGCAGTCTGGGTGCTGCAAACCACCAACACAATGTGCATACACATTTGTGAACCCAACATATTGGATTAGTCCAATAAACAATGCAGCAGACATGGATTGTCTTCAATGGAGCAACGACCAGACAACACTTTGTTACAACTGTGACTCATGCAAGGCTGGTTTGTTGGCAAATCTTAGGAAGGAATGGAAAAGAGCTAATGTGATATTGATCATCAGTGTTGTTGTTTTAATTGTGGTTTATTTGATTGGTTGCTTTGCTTTTAGGAATGCCAAAACTGAGGATCTCTTTCGTAAGTACAAACAAGGCTACACTTAA 810 0.3889 MAMSNNIIGFINLVAVILSIPIIGAGIWLTNEPADTCVKFLQWPVIILGVLLLVVSLAGLIGSFWRISCLLIFYLVAMLVLIILLVCLVIFVYMVTLRGHGMIEPNRAYLEYRLDDFSGFLKRRVRSSFKWDAIRRCLSETNMCGELNQSFRMAQDFFNARLTPMQSGCCKPPTQCAYTFVNPTYWISPINNAADMDCLQWSNDQTTLCYNCDSCKAGLLANLRKEWKRANVILIISVVVLIVVYLIGCFAFRNAKTEDLFRKYKQGYT 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01385 269 Pfam Tetraspanin family 6 250 IPR018499 GO:0016020
Mepo5g01385 269 PRINTS Transmembrane four family signature 38 64 - -
Mepo5g01385 269 PRINTS Transmembrane four family signature 6 29 - -
Mepo5g01385 269 PRINTS Transmembrane four family signature 65 93 - -
Mepo5g01385 269 ProSitePatterns Transmembrane 4 family signature. 49 71 IPR018503 GO:0016020
Mepo5g01385 269 PANTHER TETRASPANIN-8-RELATED 1 258 IPR044991 GO:0009734|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01385 Mepo-Chr5 14351345 14353528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01385 1 269 Miscellaneous Gene Families AT5G46700 67.658 1.82e-129 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01385 - - gmx:100795775 452.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01385 5 14351345 14353528 Mepo5g01385 5 14351345 14353528 ECH
Mepo5g01385 5 14351345 14353528 Mepo1g02535 1 26731128 26732825 PCT