Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01363 ATGTCGATAAAAACCGTTAAAGTCAGCAATGTTTCCTTGGGAGCAACCGAGCGGGACATTCAAGAGTTCTTTTCCTTTTCTGGGGACATTGCATATGTTGAACTACGGAGTCATGATGAACGATCACAAACTGCTTATGTTACCTTCAAGGATTCACAGGGAGCTGAGACTGCAGTGTTGCTATCGGGAGCAACAATAGTCGACCTGTCGGTTACAATAACTCTGGATCCAGATTACCAGCTTCCACCTGATGCCCTGGTTTCACCTGTAAGTGAAAGTAAAACTCCTGGTGGTGCTGACTCTGCTTTACGGAAGGCAGAGGATGTAGTCTCCAGCATGGCAGCCAAAGGCTTTATCTTAGGCAAAGATGCTGTCAACAAAGCAAAGACTTTTGATGAGAAGCTCCAGTTATCATCGAAAGCCTCAGCAACAGTTGCATCTGTTGACCAAAAACTTGGGCTTAGTGAGAAAATAGGTGCTGGTGCTTCAGTTGTGAGTGATAAAGTTCGAGAAGTGGATCAAAAGTTTCTGGTTTCCGAAAAGACAAAATCAGCATTTGCAGCTGCTGAACAGACAGTCAGTACTGCTGGTTCTGCCATAATGAAGAATCGCTATGTACTTACTGGGGCCTCTTGGGTAACGGGTGCTTTTAACAGGGTTTCTAAGGCAGCTGTGGAAGTAAGTCAAAAAACAAAAGAGAAAGTGGAGAATGCAGAACAGCAAGAGAAGCGACAGGTTGAAGATCAGTATGCACAGGTCCTTTCCGAGCCCTCAAAAGCAGCAGCAGCAAGTGAGCAGCAGTCTTCCAAGCCTGGTCCTGCTCCTGCTCAGGGTTTGATCCTTTGA 846 0.4586 MSIKTVKVSNVSLGATERDIQEFFSFSGDIAYVELRSHDERSQTAYVTFKDSQGAETAVLLSGATIVDLSVTITLDPDYQLPPDALVSPVSESKTPGGADSALRKAEDVVSSMAAKGFILGKDAVNKAKTFDEKLQLSSKASATVASVDQKLGLSEKIGAGASVVSDKVREVDQKFLVSEKTKSAFAAAEQTVSTAGSAIMKNRYVLTGASWVTGAFNRVSKAAVEVSQKTKEKVENAEQQEKRQVEDQYAQVLSEPSKAAAASEQQSSKPGPAPAQGLIL 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01363 281 Gene3D - 2 74 IPR012677 -
Mepo5g01363 281 SMART rrm1_1 5 74 IPR000504 GO:0003723
Mepo5g01363 281 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 7 66 IPR000504 GO:0003723
Mepo5g01363 281 FunFam RNA recognition motif-containing protein 1 74 - -
Mepo5g01363 281 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 4 242 - -
Mepo5g01363 281 SUPERFAMILY RNA-binding domain, RBD 4 80 IPR035979 GO:0003676
Mepo5g01363 281 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 4 78 IPR000504 GO:0003723
Mepo5g01363 281 Coils Coil 221 256 - -
Mepo5g01363 281 MobiDBLite consensus disorder prediction 235 281 - -
Mepo5g01363 281 MobiDBLite consensus disorder prediction 259 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01363 Mepo-Chr5 14147664 14152819 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01363 - - gmx:100809613 436.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01363 5 14147664 14152819 Mepo5g01363 5 14147664 14152819 ECH