Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01344 ATGGGTTCTAGACCATATTTGAAAAAAGGGGGTTCTTTGGTTAGGATTGCTCAATTGAGTGATGATATGGATCAAGAAACTGAGAATCTTGCTACTTACACAGTGCAAGTTCCTATAACACCTGATAACCAACCTATGTCCGCGAAGGATATTACTCTTGAGAGATCAACTTCAAGGAGAGTGGAGGATCAATATGCGTCGAGTTCTATGTTTACGGGAGGTTTTAATCAGGCGACTAGAGCTCAGTTCAAGGATAAGGTGATTGAGTCCGAATCAAGTCATCCTCAGATGGCCGGGACTAAAGGGTCTGCGTGTGAGATGTCGGGGTGTGATGGAAGAGTCATGACTGATGAAAGAGGTTTGGAAATACTTCCTTGTGAGTGTGATTTCAAGATTTGTAGGAATTGTTATAAGGATACTTTGAGGAACGGTGAGGGGATTTGCCCTGGATGCCAAGAGGCTTACAAAGAGCAAGCGATGGAAGAGGCTGCTGCTGTGGTTAATCGACAATCACTACCTTTGCCACCTGGTGCGTCGAAGATGGAGAGGAGATTGTCGATGATGAAATCGGGGAATTTGATGAGGAGTCAGACTAATGAATTTGATCATGCTCAATGGTTGTTTGAGACTAAAGGGACTTATGGGTATGGAAACGCTATGTGGCCTAAAGATCCGGTGAATGGTGCTAGTTCTAGTTCTGGTTCTGATTGGATGGGGGGTGACCCTAATGCTTTCAAAGAAAAGCCGTGGAGGCCATTGACCAGGAAAGCGAATATTCGTGCTGCAATTCTGAGTCCTTATCGGCTCATAATATTAGCTCGGATGGTGATTCTGGTTCTCTTCCTTCACTGGAGGGTAGTAAACCCGAATGACGATGCAATGTGGCTGTGGGGCATGTCCGTAGTTTGTGAAATCTGGTTTGCATTCTCCTGGCTTCTTGACCAGCTCCCTAAGCTCTTTCCGATAAATCGTGTTGCTGATCTCGATGTTTTGAAAGAGAAGTTCGAAACTCCAAGTCCAGCCAATCCAACAGGGAAATCTGATCTCCCGGGAATTGATATGTTTGTGTCAACTGCCGATCCAGAAAAAGAGCCACCCCTTGTTACCGCAAATACCATTCTTTCAATTCTAGCAGCTGAGTACCCTGTTGATAAACTCGCATGTTATGTCTCTGATGATGGCGGTTCACTTCTAACTTTTGAGGCCATGGCCGAGGCAGCGAGTTTTGCGGAGTTGTGGGTTCCATTTTGTCGGAAGCACGACATTGAACCAAGGAACCCGGAGTCTTACTTTAGTCTGAAGAGAGATCCCTATAAGAACAAAGTACGTTCGGACTTTGTTAGGGACCGCAGGAAGGTGAAGCGCGAGTATGAGGAATTCAAGGTTCGGATTAATGGCCTTCCTGATTCAATCCGGAGGCGCGCTGATGCTTATAATGTTAGAGAGGAGATCAAAGCTATGAGGCTATGGAGAGAGGCTGCAAATGATGAACCGCTGGAGAATTTGAAAATTTCTAAAGCTACATGTATGACCGATGGTACTCACTGGCCTGGGACTTGGACAACTCCTGCACCAGAGCATTCTCGGGGTGATCATTCCAGCATCATACAGGTGATGCTGAAACCTCCAAGTGACGAGCCACTAACCGGCCCAGAATCAGATTCAAACGGCATGGATTTGACCGAAGTTGATATTCGTCTTCCTATGCTAGTCTATGTTTCTCGTGAAAAAAGACCTGGCTATGATCACAATAAGAAAGCGGGGGCCATGAATGCCTTGGTTCGAGCTTCAGCCGTAATGTCTAACGGTCCTTTCATACTTAATCTTGACTGTGACCATTACATATATAACTCCGAGGCAATCAGGGAAGGTATGTGCTATATGATGGACCGCGATGGGGACAAGATCAGCTACGTTCAATTTCCTCAAAGGTTTGAAGGAATCGACCCGTCAGATCGGTATGCCAATCATAACACTGTCTTCTTTGATGTCAATATGCGAGCTCTCGATGGTATTCAGGGTCCTGTATATGTTGGTACTGGATGCTTATTTCGAAGAACTGCACTCTATGGCTTTGATCCTCCCCGAGTTCAAGAAGAGGCCACCGGTTGGTTTGGTAGTAAGAAAAAGAATTCCTCAACAGTTGCTTCAGTCCCTGATGTAGAGGATCAATCTTTGAGGAATGGTGGTAGCATTGATGAAGAAGAAATGAGTAGCGCTCTTATTCCTAAGAAATTCGGCAACTCGACTCTTTTTGTTGACTCAATCAGGGTGGCAGAGTTCCAAGGGAGACCACTTGCTGATCATCCGTCCATCAAAAACGGACGTCAACCTGGTGCTCTAACACTTCCTCGAGATCTTCTTGATGCCGCTACTATCGCTGAGGCAATCAGTGTCATCTCATGCTGGTACGAAGATAAGACCGAATGGGGAGATAGAGTCGGATGGATTTACGGGTCGGTAACCGAGGATGTTGTGACAGGTTATAGAATGCACAATAGAGGATGGAGGTCTGTGTATTGTGTGACCAAGAGGGATGCCTTCCGAGGTACTGCTCCAATCAATTTGACAGACCGGCTTCACCAAGTTCTTCGATGGGCAACTGGCTCGGTCGAAATATTCTTTTCGCGGAACAATGCAATCTTGGCTAACTCTAGACTGAAATTTTTGCAAAGGATTGCTTATCTTAATGTTGGAATATATCCATTCACTTCATTCTTCCTCATTGTTTATTGCTTCCTCCCGGCTCTTTCGCTTTTCACCGGCCAGTTCATCGTCCAATCCCTTCAAGTCACTTTCTTAATTTACCTCTTGGGAATCACCGTGACACTTATTCTTCTTGCTATTCTCGAGATCAAATGGTCAGGCATCGAACTCGAAGAATGGTGGAGAAACGAGCAATTCTGGTTGATCGGAGGCACAAGTGCACATTTTGCCGCGGTTCTTCAAGGTCTACTCAAAGTTATAGCCGGTATCGAGATCTCATTCACTTTAACATCAAAATCCTCCGGTGATGATGAAAACGACGAGTACGCTGATCTCTACATCATCAAATGGTCCTCCTTGATGATACCGCCGCTTACAATCATGATGGTCAACTTAATCGCAATTGCAACTGCGGTTAGTAGGACTATATACAGCGAGGATCGTCAATGGAGTAGTTTACTTGGAGGTGTGTTCTTCAGTTTTTGGGTATTGGCTCATTTATATCCATTTGCAAAAGGGCTTATGGGTAGAAGAGGTAGAACACCAACAATTGTGTTTGTTTGGTCAGCATTAATATCAATCACTATATCACTTCTATGGGTTGCTATTGATCCTCCTTCTGGTAACAATCAAATTGGAGGGTCATTCCAATTTCCTTGA 3366 0.4495 MGSRPYLKKGGSLVRIAQLSDDMDQETENLATYTVQVPITPDNQPMSAKDITLERSTSRRVEDQYASSSMFTGGFNQATRAQFKDKVIESESSHPQMAGTKGSACEMSGCDGRVMTDERGLEILPCECDFKICRNCYKDTLRNGEGICPGCQEAYKEQAMEEAAAVVNRQSLPLPPGASKMERRLSMMKSGNLMRSQTNEFDHAQWLFETKGTYGYGNAMWPKDPVNGASSSSGSDWMGGDPNAFKEKPWRPLTRKANIRAAILSPYRLIILARMVILVLFLHWRVVNPNDDAMWLWGMSVVCEIWFAFSWLLDQLPKLFPINRVADLDVLKEKFETPSPANPTGKSDLPGIDMFVSTADPEKEPPLVTANTILSILAAEYPVDKLACYVSDDGGSLLTFEAMAEAASFAELWVPFCRKHDIEPRNPESYFSLKRDPYKNKVRSDFVRDRRKVKREYEEFKVRINGLPDSIRRRADAYNVREEIKAMRLWREAANDEPLENLKISKATCMTDGTHWPGTWTTPAPEHSRGDHSSIIQVMLKPPSDEPLTGPESDSNGMDLTEVDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRASAVMSNGPFILNLDCDHYIYNSEAIREGMCYMMDRDGDKISYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGIQGPVYVGTGCLFRRTALYGFDPPRVQEEATGWFGSKKKNSSTVASVPDVEDQSLRNGGSIDEEEMSSALIPKKFGNSTLFVDSIRVAEFQGRPLADHPSIKNGRQPGALTLPRDLLDAATIAEAISVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNAILANSRLKFLQRIAYLNVGIYPFTSFFLIVYCFLPALSLFTGQFIVQSLQVTFLIYLLGITVTLILLAILEIKWSGIELEEWWRNEQFWLIGGTSAHFAAVLQGLLKVIAGIEISFTLTSKSSGDDENDEYADLYIIKWSSLMIPPLTIMMVNLIAIATAVSRTIYSEDRQWSSLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSALISITISLLWVAIDPPSGNNQIGGSFQFP 1121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01344 1121 Pfam Cellulose synthase 352 1112 IPR005150 GO:0016020|GO:0016760|GO:0030244
Mepo5g01344 1121 SUPERFAMILY RING/U-box 90 158 - -
Mepo5g01344 1121 SUPERFAMILY Nucleotide-diphospho-sugar transferases 367 694 IPR029044 -
Mepo5g01344 1121 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 554 706 IPR029044 -
Mepo5g01344 1121 FunFam Cellulose synthase-like protein D3 88 171 - -
Mepo5g01344 1121 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 88 169 IPR013083 -
Mepo5g01344 1121 Pfam RING/Ubox like zinc-binding domain 108 156 - -
Mepo5g01344 1121 Coils Coil 16 36 - -
Mepo5g01344 1121 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 251 1091 - -
Mepo5g01344 1121 FunFam cellulose synthase-like protein D3 557 694 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01344 Mepo-Chr5 13797921 13803249 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01344 21 1121 Glycosyltransferase AT3G03050 73.921 0.0 1722
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01344 K20924 - gmx:100813900 1867.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01344 5 13797921 13803249 Mepo5g01344 5 13797921 13803249 ECH