Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01249 ATGGGTAAACCAAATCCACAGAAATCAGGGACCGGCGGCGACCTTCACGCGGCGGCAAGGTCCGGTGATCTGATAGCAGTTCAGTCAATTTTGATTTCAAATCCTCTGGCCGTCAATTCCAGAGATAAGCACTCTAGAACACCACTACATTTAGCAGCATTTTCTGGGCAAACAGAAGTAGTCAGTTACCTCTGCAAGAACAAGGCTGATTTCGGTGCTTCTGCTATGGATGATATGGCCGCAATACACTTCGCGGCACAGAAGGGGCATTTAGAAGTTGTTCGAGCTCTGGTTTCAGCTGGTGCCTCTTTCAAAGCCTCTACTCGGAAAGGCGTGACACCATTACATTTTGCTGTTCAAGGTTCCCACCTGGAACTTGTCAAGTACTTATCCAAGAAAGGGGCAAGTCTCACTATCAAAACAAAGGCAGGAAAGACCCCATTGGATCTTGCTACCAATGATGAAGTCCGCGCCTTTCTTGAGGAATTTGAAAAGTCAGCTAAGAATGGAGAGTCGAAGAACGAAGATAAAACCGAAGGTTCTGATCCAAAAGGAAACGAAGAATCCGATCCAAAAGCACCTGAAGAATCTGATCCAAAGGCATCATCCTCTTTAGGCTCCGAAGGTAATTTGAGTAGTGAACCTCCTGCAGCTTCTGTTGATGAAGATAGTGGTGAGAAAGAGAAGAGGAAGGGTAATGAAGACGATGCAAGGGAAAACTCTTCACAACCGAAAAAGGCGAGAGTTCAGCTAAGCCATCTCCAAAGTTCAGATGATGTCCAAGAAGAAGAGACCCTGTAG 801 0.4607 MGKPNPQKSGTGGDLHAAARSGDLIAVQSILISNPLAVNSRDKHSRTPLHLAAFSGQTEVVSYLCKNKADFGASAMDDMAAIHFAAQKGHLEVVRALVSAGASFKASTRKGVTPLHFAVQGSHLELVKYLSKKGASLTIKTKAGKTPLDLATNDEVRAFLEEFEKSAKNGESKNEDKTEGSDPKGNEESDPKAPEESDPKASSSLGSEGNLSSEPPAASVDEDSGEKEKRKGNEDDARENSSQPKKARVQLSHLQSSDDVQEEETL 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01249 266 SMART ANK_2a 77 106 IPR002110 GO:0005515
Mepo5g01249 266 SMART ANK_2a 44 73 IPR002110 GO:0005515
Mepo5g01249 266 SMART ANK_2a 110 139 IPR002110 GO:0005515
Mepo5g01249 266 ProSiteProfiles Ankyrin repeat profile. 110 142 IPR002110 GO:0005515
Mepo5g01249 266 ProSiteProfiles Ankyrin repeat region circular profile. 77 103 - -
Mepo5g01249 266 ProSiteProfiles Ankyrin repeat profile. 44 76 IPR002110 GO:0005515
Mepo5g01249 266 MobiDBLite consensus disorder prediction 220 243 - -
Mepo5g01249 266 MobiDBLite consensus disorder prediction 164 197 - -
Mepo5g01249 266 MobiDBLite consensus disorder prediction 164 266 - -
Mepo5g01249 266 SUPERFAMILY Ankyrin repeat 15 154 IPR036770 -
Mepo5g01249 266 Gene3D - 11 184 IPR036770 -
Mepo5g01249 266 PRINTS Ankyrin repeat signature 45 60 IPR002110 GO:0005515
Mepo5g01249 266 PRINTS Ankyrin repeat signature 93 107 IPR002110 GO:0005515
Mepo5g01249 266 Pfam Ankyrin repeats (3 copies) 77 140 IPR002110 GO:0005515
Mepo5g01249 266 Pfam Ankyrin repeats (3 copies) 15 72 IPR002110 GO:0005515
Mepo5g01249 266 ProSiteProfiles Ankyrin repeat region circular profile. 44 70 - -
Mepo5g01249 266 ProSiteProfiles Ankyrin repeat profile. 77 109 IPR002110 GO:0005515
Mepo5g01249 266 MobiDBLite consensus disorder prediction 200 214 - -
Mepo5g01249 266 PANTHER ANKYRIN REPEAT PROTEIN 12 183 - -
Mepo5g01249 266 ProSiteProfiles Ankyrin repeat region circular profile. 110 142 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01249 8 153 Miscellaneous Gene Families AT1G05640 37.908 2.62e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01249 - - psat:127119852 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01249 5 12713278 12715744 Mepo5g01249 5 12713278 12715744 ECH