Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01233 ATGCTTCAGGAGAGGCCAATTTCGTTGCGACAGAGTCCTTCGAGAAGGAGGTTGTTGAGGCCTGGTGTTGATACTGATGATAGAGGTTGGACCTCACTTCATGTTTATGCAAGGAAAGGTGATATTAAGCTGGTAAAAAAGCTTCTCAACGAAGGAATGGATGTTAATGTGACTGCATGGGGCCCTAAATCTAAAGGCGTGACCCCTCTCCACCTTGCCGCCGAAGGCGGTCACCTCGGAGTGATGGATGAACTGCTTGAGCGTGGTGCCAATATTGATGCCAGAACTAAGGGCGCTTGTGGCTGGACACCGCTCCACATTGCAGCTAAAGAGAGGAATAGGGATGCTGTGAAATTCTTGGTAGAGAATGGAGCATTCTTGCCACCGGATATCAACGATAGCAGATTTAATCCTCCACTTCATTACTGCCCAGGACTTGAATGGGCCTATGAGGAAATGAAGAGACTTCGACAGGAAGAATCGTCTCTGGAGGAGACATCTTGCAGCTCTGAAAATTAA 519 0.4798 MLQERPISLRQSPSRRRLLRPGVDTDDRGWTSLHVYARKGDIKLVKKLLNEGMDVNVTAWGPKSKGVTPLHLAAEGGHLGVMDELLERGANIDARTKGACGWTPLHIAAKERNRDAVKFLVENGAFLPPDINDSRFNPPLHYCPGLEWAYEEMKRLRQEESSLEETSCSSEN 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01233 172 ProSiteProfiles Ankyrin repeat profile. 28 60 IPR002110 GO:0005515
Mepo5g01233 172 Gene3D - 62 165 IPR036770 -
Mepo5g01233 172 Pfam Ankyrin repeats (3 copies) 17 95 IPR002110 GO:0005515
Mepo5g01233 172 Pfam Ankyrin repeat 100 125 IPR002110 GO:0005515
Mepo5g01233 172 SUPERFAMILY Ankyrin repeat 25 143 IPR036770 -
Mepo5g01233 172 ProSiteProfiles Ankyrin repeat profile. 65 97 IPR002110 GO:0005515
Mepo5g01233 172 ProSiteProfiles Ankyrin repeat region circular profile. 28 57 - -
Mepo5g01233 172 ProSiteProfiles Ankyrin repeat region circular profile. 65 97 - -
Mepo5g01233 172 ProSiteProfiles Ankyrin repeat region circular profile. 100 125 - -
Mepo5g01233 172 ProSiteProfiles Ankyrin repeat profile. 100 125 IPR002110 GO:0005515
Mepo5g01233 172 Gene3D - 6 61 IPR036770 -
Mepo5g01233 172 SMART ANK_2a 28 57 IPR002110 GO:0005515
Mepo5g01233 172 SMART ANK_2a 65 94 IPR002110 GO:0005515
Mepo5g01233 172 SMART ANK_2a 100 133 IPR002110 GO:0005515
Mepo5g01233 172 Coils Coil 146 166 - -
Mepo5g01233 172 PANTHER ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED 26 125 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01233 32 155 Acyl Lipid Metabolism Gene Families AT5G53470 32.258 5.19e-12 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01233 - - aprc:113868977 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01233 5 12523435 12526488 Mepo5g01233 5 12523435 12526488 ECH