Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01217 ATGGCCTTCAACCACAAATCCAAGAGGACTAATTCACCTTCACATTTCAATTTCTGCATCACCCTTTTCTCCATTTCCTTCTTCACTATACCAACTTTTTTCCTTCTAAACAATTCCACTTCAAACTCCAAAAGCACCAACCTTGCGAAAACTTTTTCAGGTGATCTTCGCTCAGCCGAATTTTCATGGAACAGCCTTTCTTTTTCACAAAATGGCAATCCTACACCTGTAATTCTCAAAATTGCAGTCTTTTCTAGAAAATGGCCGATGGGAACTGTTCCAGGCGGCATGGAACGCCATGCTCACAACCTTCACAGTGCTTTAGCTCGCCGTGGACATCAAGTTCATGTCTTTACTTCCCCTTCAGAAGATGAAACAACAACAACTTCAATCTCTTCAAAAGGTTCACCTTACATTCATTTTCATGAAGGTGAGCCCGGCAAATGGCGTTACAACAAAGCATTTGAACTTTTTCTTGAAGAAAACCGAAGAGATCAACCTTTTGATGTTGTTCATTCAGAAAGTGTAGCACTTCCTCATTGGCTTGCAAAAGATCTTCCGAATCTCGTTGTATCCTGGCATGGCATAGCATTAGAAAGCTTGCAATCGAGCATTTTTCAGGACTTGGTTCGTCCACAAGATGAGCCAAGATCACAGGATTTTGAAAAAGGGTTACAAGGGGTTATTCCAAAGGTTCTCAATGAAATAAGATTCTTCCACAAATATTCTCATCATGTTGCTACTAGTGATAGTAGTGGTGAGATGTTAAGGGATGTTTACCAAATTCCAAGTAGAAGAGTTCATGTGATTCTCAATGGTGTTGATGAAGAAGATTTTAGAGAAGATGCTGAATTAGGAAAGGAGTTTAGAACAAAAATTGGGATTCCAAGTAATGCTAGTTTAGTATTTGGAGTTGCTGGAAGATTAGTAAAGGATAAAGGTCATCCATTACTTCACGAAGCATTTTCAAGGCTTATAACAAAGTACGCCAATTTGTATTTGATTGTAGCTGGTTCTGGACCATGGGGGAATAGGTATAAGGATATAGGGAACCAAGTTTTTGTTCTTGGATCAATGAATCCTTCTATGTTAAGAGCATTCTATAATGCTATTGACATTTTTGTTAATCCTACATTAAGACCACAAGGGCTTGATCTTACACTAATGGAGGTTATGATGATTGGTAAGCCACTTTTGGCATCAAGGTTTCCAAGCATTAAAGGTAGTGTTATTGTTGATGATGAATTTGGTTATATGTTTTCTCCAAACGTGGACTCACTTTTGGAAGCACTTGAAGAAGTTGTGAAGGATGGTAAAGAGAGGCTGGCAAGAAGAGGAAATGCTTGCCGTGAATATGCAAATTCTAGGTTTACTTCAAAAAAGATGGCATTAGCGTATGAGAGACTATTCTTATGCATAAAAAGGGATACATTTTGTACCTATCCTTGA 1449 0.3851 MAFNHKSKRTNSPSHFNFCITLFSISFFTIPTFFLLNNSTSNSKSTNLAKTFSGDLRSAEFSWNSLSFSQNGNPTPVILKIAVFSRKWPMGTVPGGMERHAHNLHSALARRGHQVHVFTSPSEDETTTTSISSKGSPYIHFHEGEPGKWRYNKAFELFLEENRRDQPFDVVHSESVALPHWLAKDLPNLVVSWHGIALESLQSSIFQDLVRPQDEPRSQDFEKGLQGVIPKVLNEIRFFHKYSHHVATSDSSGEMLRDVYQIPSRRVHVILNGVDEEDFREDAELGKEFRTKIGIPSNASLVFGVAGRLVKDKGHPLLHEAFSRLITKYANLYLIVAGSGPWGNRYKDIGNQVFVLGSMNPSMLRAFYNAIDIFVNPTLRPQGLDLTLMEVMMIGKPLLASRFPSIKGSVIVDDEFGYMFSPNVDSLLEALEEVVKDGKERLARRGNACREYANSRFTSKKMALAYERLFLCIKRDTFCTYP 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01217 482 Pfam Glycosyltransferase Family 4 95 277 IPR028098 -
Mepo5g01217 482 Gene3D Glycogen Phosphorylase B; 79 283 - -
Mepo5g01217 482 Pfam Glycosyl transferases group 1 301 443 IPR001296 GO:0016757
Mepo5g01217 482 Gene3D Glycogen Phosphorylase B; 284 471 - -
Mepo5g01217 482 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 80 470 - -
Mepo5g01217 482 PANTHER GLYCOSYLTRANSFERASE 11 482 - -
Mepo5g01217 482 CDD GT4_PimA-like 80 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01217 Mepo-Chr5 12362038 12363599 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01217 1 482 Glycosyltransferase AT4G19460 60.563 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01217 - - gmx:100817087 729.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01217 5 12362038 12363599 Mepo5g01217 5 12362038 12363599 ECH
Mepo5g01217 5 12362038 12363599 Mepo1g02312 1 23867522 23868988 PCT