Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01175 ATGGAGATGGAGACGGAGAATAGTGATAGAGGAAACCAAATAAAAAGTGGTAGCTTTAGGAAGAGTAGCTTTAGAAAGGGTAGTTTCAGATTGGGAGGAAAAGATCACACAGTGGTTGAGTTAGGTAGTATTGACACACAAAAACTTCTCTTAGAAGGTGGTGGTGGAGAAATAAGAGAGAAACAAAAAACTCTCAAAAACTCTCTTTCTCTTAGGCAGATGAAAACCCTCACTGCTCTCTCAGATACTATCTTGCCTTCTATCAATGACTTTGTTCCTGTCTCCGACGACGACGAATCCGCTGCTACCTTCTACCGTATTTCAGCTTCCATGGCTGGAACACCTGAACGTGTTGGGGGTGTAATAAGTGAGAGACTGATTCATCCAATGACAATCGTACTGAAGTTGGTGTTATGGTTTCTGTCTACATGGTTAGGAACAATCATTTTATGTGGCATGGGTTGCTTATCCACAAAGTTCCCATTTATACACACTTTCCCTGATTTACCTCTACACAAACGCCAACAGATTATGCAATCTTGGTCTCTCAGTTTCTTTCGTCACCTTAGAATGTTTTTCAGAACAATCAAACTTCTCACTCTCCTAATCTTCTTCACTCAGCTAGATGAATCAGAAGACAATTGTTCATGGAAAGCAATTGGATACTGTGGACCTGATCCAGAATTCAAAGCTCAGTTAAAGAACCATTTTTTACATGGAACATGTAAAGAAAAACAAGATTCTGAGGAAGGTGATGATGATGCTGAACAAGCCATAGGACCTCTTTACAAAGGGCTCGTCCATCTCAACTATCCGAGAGACATAACTGTCGACACTCTAAGACGATTTGGATTCCCTGTCTCGGTTACCCGTCGAAAACAGAAAACTGCTCCAAGCTTATCATCCCCTTCTTTAGTTATACAATGTGACGCTGTGGTAGTTGGTTCCGGCTCAGGAGGTGGAGTTGTAGCCGGAATTCTGGCGAATGCCGGTTACAAAGTGTTGGTTTTGGAGAAAGGAGGCTATTCTGCTAGGAGCAATCTTTCTCTTCTTGAAGGACCAACTATGGATCAAATGTACCAATCTGGTGGTTTGGTTGCAACTGATGATATGAATATCTTCATATTATCAGGATCAACTGTTGGTGGAGGGTCTGCAATCAATTGGTCTGCAAGCATCAAAACACCTCAGCATGTGTGCAAAGAGTGGTGCGAAAAACACGGGCTAGAATTGTTCGAAAGTGAATTGTATCAAGAAGCTATGGAAACTGTTTGCGAGAAAATGGGAGTTCAGTCCGAGATAGAAGAGGAAGGTTTCAACAACGCGATTTTGAGAAAAGGGTGTCAAGAAATGGGATATCCTGTGAATAACATTCCAAGGAATGCTTCGCCTGATCACTACTGTGGATGGTGCTGTTTGGGATGTAAGGATGGAAAGAAGAAGGGTACATCAGAAACATGGTTGGTGGACTTGGTGAAATCTGGCAATGGAGCGATTCTTCCAGGCTGTACGGCGATGAAAGTTTTGCATAAGAAAAAGAAAGGAAGCGGTGAAAAGACCGCGCGAGGAGTGGCATTTGAATTTGAATACAAAGGAAGTAAAGACATCTTTGTGGTCGAATCCAAGGTCACAATTGTTGCTTGTGGAACACTCAATACTCCATCATTGCTTAAAAGAAGCGGATTAAAAAATAACAACATAGGGAGAAACTTGCATCTTCATCCAGTGGTAATGGCCTGGGGCTACTTCCCTGATGCACCTACAGAACCTACAGGTGCATCTGAGGTGTGGCCCGAGACATGGAAAAAGAGCTACGAAGGAGGGATAATGACAGCAATGTCTCCTGTTGTCGCAGAGTTTGAGAAATCAGGATACGGTGCTGTGATCCAAACACCTGCATTGCATCCCGGTACATTCTCGATTGTCATGCCGTGGGTTTCTGGAAGCGATATAAAAGATAGAATGCGAAAGTTTTCAAGAACAGCTCATATATTTGCACTAGCAAGGGATCAAGGATCGGGAAATGTGCACTCGCCAAGCCGTATAAGTTATGAAATGGAAGATGTTGATGAAGAGAATTTACAGAAGGGAATTGATAAGGTACTGAGAATTCTGGCTGCAGCCGGTGCTGAAGAGATTGGAACTCATCATAACAAGGGAAATACCTTAAATATAAAGAACGCGAGTTACCATGAATTTGAGCAATTTGTTAAAAAGGAAAGTTCAAGGTCGTTAACAGACCTTTCAACGCCTTTGTGCTCGGCACATCAGATGGGGTCTTGTCGGATGGGATCTAATCCGAAGGAATCGGTGGTGAAGGAGACAGGGGAGACATGGGAAGTGGAGGACCTTTTTGTGGCAGATGCAAGTGTCTTTCCTACAGCGTTGGGCGTGAATCCAATGATCACTGTTCAATCAATTGCTTACTGCACTGCACAATCTGTTCTTCAGGTTCTTAAAAGGAAACGAACTAAATGA 2478 0.4282 MEMETENSDRGNQIKSGSFRKSSFRKGSFRLGGKDHTVVELGSIDTQKLLLEGGGGEIREKQKTLKNSLSLRQMKTLTALSDTILPSINDFVPVSDDDESAATFYRISASMAGTPERVGGVISERLIHPMTIVLKLVLWFLSTWLGTIILCGMGCLSTKFPFIHTFPDLPLHKRQQIMQSWSLSFFRHLRMFFRTIKLLTLLIFFTQLDESEDNCSWKAIGYCGPDPEFKAQLKNHFLHGTCKEKQDSEEGDDDAEQAIGPLYKGLVHLNYPRDITVDTLRRFGFPVSVTRRKQKTAPSLSSPSLVIQCDAVVVGSGSGGGVVAGILANAGYKVLVLEKGGYSARSNLSLLEGPTMDQMYQSGGLVATDDMNIFILSGSTVGGGSAINWSASIKTPQHVCKEWCEKHGLELFESELYQEAMETVCEKMGVQSEIEEEGFNNAILRKGCQEMGYPVNNIPRNASPDHYCGWCCLGCKDGKKKGTSETWLVDLVKSGNGAILPGCTAMKVLHKKKKGSGEKTARGVAFEFEYKGSKDIFVVESKVTIVACGTLNTPSLLKRSGLKNNNIGRNLHLHPVVMAWGYFPDAPTEPTGASEVWPETWKKSYEGGIMTAMSPVVAEFEKSGYGAVIQTPALHPGTFSIVMPWVSGSDIKDRMRKFSRTAHIFALARDQGSGNVHSPSRISYEMEDVDEENLQKGIDKVLRILAAAGAEEIGTHHNKGNTLNIKNASYHEFEQFVKKESSRSLTDLSTPLCSAHQMGSCRMGSNPKESVVKETGETWEVEDLFVADASVFPTALGVNPMITVQSIAYCTAQSVLQVLKRKRTK 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01175 825 Pfam GMC oxidoreductase 681 810 IPR007867 GO:0016614
Mepo5g01175 825 PIRSF Lg_Ch_AO 57 825 IPR012400 GO:0046577
Mepo5g01175 825 SUPERFAMILY FAD/NAD(P)-binding domain 306 816 IPR036188 -
Mepo5g01175 825 Gene3D - 295 621 IPR036188 -
Mepo5g01175 825 Gene3D - 699 821 IPR036188 -
Mepo5g01175 825 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 64 824 - -
Mepo5g01175 825 Pfam GMC oxidoreductase 310 576 IPR000172 GO:0016614|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01175 Mepo-Chr5 11917633 11926172 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01175 34 819 Acyl Lipid Metabolism Gene Families AT4G19380 56.980 0.0 854
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01175 K17756 - gmx:100779139 1249.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01175 5 11917633 11926172 Mepo5g01175 5 11917633 11926172 ECH
Mepo5g01175 5 11917633 11926172 Mepo1g02299 1 23669102 23674553 PCT