Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01173 ATGTGGAGGAACTATCATTTCCCTAAGATAGCAAAGCACCACATAGTCGTATTTACTATTAGATGCTATGGAACAGAGGGGAGAAGAAAAGATGGTGAACAAGTACCTCCAAGTGACAAGGTTTATGAATGCATTCTTTTTAGAGGAAGTGACATTAAGGATTTGCAGATCAAGTCCCCCTCCACATCTGGCAGGGCAGAAGAGCAGATAAGTAGTGATCAAGCTATTATGCAGTCACAATATTCTGGGGTGCTAAGTTCTCCGGTGGCCCCAGTTTGTGGGAGAAGTTTGACGGAATCGATCCAAAGGCAAGATAGTCCTGCTAATGCATGCAATGCCCTTCCTGTTGGGCGGCCTTCTCATCAGTCTATAACTGAGATGACACCTATGCCTTATTCTGTGTCTGTGACTACTGATGCATCAAACACACCTTCATTTTGTTCACCTCTCCAAGACATAAATTCTGTGGAAGGTCGAATAACTGGAAAGATCTGTCCTTACCTAAGTCCAATTTCTCCTCAATATTCTGTCCATAATCCTGGTTCTTCAATTGTGGATTCTACTTTAGGTCGCTTTCCAACACCTCAATCTTTGTTAACTTCTGATCGATTTGCACATCCTAGAGACCAGTTATTAGCACAAAATTTGAACCCTAATTGGAAGGATATGGGTTCACTGCCTCTAACTTCCTCTGTACCAATGCCTTCTCCAGCATTTCAATCACCATTGCAGCATCTACCAACCTCCGTGCACAAGGCTCAATACCCAAGTCCACAGTTTACTGAAGAGTTTGATTTTGTGGCTATGAATGAAAAGTTCAAAAAGGACGAGGTATGGAATTCTATTGCAAATGCAACCACAAAAATAGAGGGAGTGGAAGACATTGAGTTTCTCAATTTGGGTGAACGAGAATGTCACAAATTAAAGTCTGCATACAAAAAAGATGACTTTTTTGACACAATTTCTTCCAACTCTATGACTCGCGGATCAAGGAATCGTTTATCTGCAAGAACAAAACAGGACACTGAGAGATTTGGCAATTTCCATCAGAGGCCTAATGCAGGTTATGGTGATTATGGCGCTGGACGCGGTGAGACTTTCAGGGGCTATTTGGGAAGGGGTTATGGTTATGGCGGGAGAGGGCATGGACCAAACTTTCCTTTCTAG 1167 0.4259 MWRNYHFPKIAKHHIVVFTIRCYGTEGRRKDGEQVPPSDKVYECILFRGSDIKDLQIKSPSTSGRAEEQISSDQAIMQSQYSGVLSSPVAPVCGRSLTESIQRQDSPANACNALPVGRPSHQSITEMTPMPYSVSVTTDASNTPSFCSPLQDINSVEGRITGKICPYLSPISPQYSVHNPGSSIVDSTLGRFPTPQSLLTSDRFAHPRDQLLAQNLNPNWKDMGSLPLTSSVPMPSPAFQSPLQHLPTSVHKAQYPSPQFTEEFDFVAMNEKFKKDEVWNSIANATTKIEGVEDIEFLNLGERECHKLKSAYKKDDFFDTISSNSMTRGSRNRLSARTKQDTERFGNFHQRPNAGYGDYGAGRGETFRGYLGRGYGYGGRGHGPNFPF 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01173 388 ProSiteProfiles FFD box profile. 310 325 IPR025761 -
Mepo5g01173 388 SMART LSM14_2 8 81 IPR025609 -
Mepo5g01173 388 SMART FDF_2 258 349 IPR019050 -
Mepo5g01173 388 MobiDBLite consensus disorder prediction 327 359 - -
Mepo5g01173 388 Pfam Scd6-like Sm domain 16 59 IPR025609 -
Mepo5g01173 388 ProSiteProfiles DFDF domain profile. 252 288 IPR025762 -
Mepo5g01173 388 Gene3D - 10 62 - -
Mepo5g01173 388 SUPERFAMILY Sm-like ribonucleoproteins 11 60 IPR010920 -
Mepo5g01173 388 PANTHER SCD6 PROTEIN-RELATED 20 382 - -
Mepo5g01173 388 Pfam FDF domain 259 346 IPR019050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01173 Mepo-Chr5 11908443 11912543 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01173 K18749 - gmx:102669894 309.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01173 5 11908443 11912543 Mepo5g01173 5 11908443 11912543 ECH