Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01151 ATGGAAGCCATCGTCTCTCCACCACCGCCGGCACCACCCACCCGCCGCCGCAACGCAGACACCACTTCAACCACCTCTCCTTCTTCCAACCACCAACCTCACCTTCTTGGTTTACGCCTCCGTCGTAACCCCAAACCAAAAAACCTCTCTCTTCTTCACAATTTCCCTCATCACCACCCTTCTTCACAACCCATTACTCCTCCAAAGAAGAACCAGAGAAGAAGAAAATGTGATGCAACTCCACACATATTGCCCTTAATGGACGCTCTTCACTTTCCCATAACCATTGATATTTACACCTCATTGGTCAAAGAATGTACTCTTTCCACCGACCCAGAAACTGCTATTGAGTTGCATACACACATCATAACTAGCGGCATCGAACTGCCATTGACATTGCTCAATCGGATTCTGATTATGTTTGTTTCATGCGGTTTATTGGAGAATGCACGCCATGTGTTTGATGTAATGTCTGTGAGGGATTTTCATTCTTGGGCAATCTTGTTTGTTGCTTATTATGAAAATGCTGAGTATGAGAATGCTATAGATGTTTTTGTTAGTATGTTAAGTCAATTGGGTGTGATGGGGTTTTCTTTTCCTCCGTGGATTTGGTCTTGTCTTCTCACAGCTTGTGCTTGTAATGTGAATGTACCTTTAGGAATGCAAGTTCATGGATGTTTATTGAAGTTGGGTGCTTGTGACCATGTGCTTATTAGTAGCTCTTTGATTAGATTTTACGGGAGGTTCAAGTGTTTGGAAGATGCAAACGTTGTTTTTAATAAAGTGTCGCGGCATAACACGTTGACTTGGACTGCGAAAATTATCAGTTGTTGTAGGGAAAGGCATTTCTCTGAGGCTCTTGGTGATTTCAAGGAAATGGGAAGGGTAGGGGTAAAGAAGGACAGTTTTACGTTTTCTAGTGTTCTCAAGGCTTGTGGAAGGATGCAGAATCGTGGAAGCTGCGGTGAACAGGTTCATGCAGATGCAATTAAACTTGGATTGGACTCGGATAGTTATGTGCAGTGTAGTTTGATAGCCATGTATGGAAGAAGTGGATTACTAAGACATGCAGAACTGGTATTTGAAACGACACGAAATGAAAGAAATGTCGATAGTTTGAATGCCATGCTTATGGGTTACATACAAAATGGTTTCTATATTGAAGCTGTTAAGTTTGTGTATCAGATGAAGGCGGCTGGAGTGCAGCCACATGAACCGCTGCTTGAAAAACTAAGAATTGCTTGTGGCAGTTCTAACTTTTCAAGCATGAACTAA 1275 0.4251 MEAIVSPPPPAPPTRRRNADTTSTTSPSSNHQPHLLGLRLRRNPKPKNLSLLHNFPHHHPSSQPITPPKKNQRRRKCDATPHILPLMDALHFPITIDIYTSLVKECTLSTDPETAIELHTHIITSGIELPLTLLNRILIMFVSCGLLENARHVFDVMSVRDFHSWAILFVAYYENAEYENAIDVFVSMLSQLGVMGFSFPPWIWSCLLTACACNVNVPLGMQVHGCLLKLGACDHVLISSSLIRFYGRFKCLEDANVVFNKVSRHNTLTWTAKIISCCRERHFSEALGDFKEMGRVGVKKDSFTFSSVLKACGRMQNRGSCGEQVHADAIKLGLDSDSYVQCSLIAMYGRSGLLRHAELVFETTRNERNVDSLNAMLMGYIQNGFYIEAVKFVYQMKAAGVQPHEPLLEKLRIACGSSNFSSMN 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01151 424 MobiDBLite consensus disorder prediction 16 33 - -
Mepo5g01151 424 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 369 403 IPR002885 -
Mepo5g01151 424 MobiDBLite consensus disorder prediction 1 15 - -
Mepo5g01151 424 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 21 416 IPR046960 GO:0003723|GO:0009451
Mepo5g01151 424 Gene3D Tetratricopeptide repeat domain 276 423 IPR011990 GO:0005515
Mepo5g01151 424 Gene3D Tetratricopeptide repeat domain 72 214 IPR011990 GO:0005515
Mepo5g01151 424 MobiDBLite consensus disorder prediction 1 77 - -
Mepo5g01151 424 Pfam PPR repeat family 266 312 IPR002885 -
Mepo5g01151 424 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 266 300 IPR002885 -
Mepo5g01151 424 Pfam PPR repeat 343 362 IPR002885 -
Mepo5g01151 424 Pfam PPR repeat 372 401 IPR002885 -
Mepo5g01151 424 NCBIfam pentatricopeptide repeat 372 403 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01151 Mepo-Chr5 11672792 11674623 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01151 293 420 Glycoside Hydrolase AT3G49170 37.405 7.52e-15 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01151 - - tpra:123907457 677.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01151 5 11672792 11674623 Mepo5g01151 5 11672792 11674623 ECH