Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01106 ATGGCGACGATAAGACCTTTACCGGAATCTGTTCGTAGCTCAATTCGTTCCTCATTTTCCCTATTCGACTTCACAAGAATCGTTGAGGAACTTGTTTACAATAGCCTCGATGCTCGCGCTACAAAGGTTTCCGTGTTTGTTGGTATTGGAAGTTGCTACTTAAAAGTAGTTGATGATGGAGGTGGGATTACTCGAGATGGACTGGAATTGGTGGGAGAAAGATATGCTACATCAAAATTTCTTAATTTGGCGGACCTGAATGCTACGAGTGAAAACTTCGGTTTTCGTGGTGAAGCTTTAGCTTCCATTTCTGAAGTCTCGTTGTTGGAAATAGTGACAAGAGCTTATGGACGGCCAAATGGATATAGGAAAGTATTGAAGGGGAGCAAGTGTATATATCTTGGTATTGATGATGATAGAAAGGAAGTAGGCACAACAGTCATTGTCTGTGAAATATTCTACAACCAACCAGTTCGGAGGAAACAAATCCAATCCAGCCCCAATAAGGTACTTCAATCAATCAAGAAATGTGTGATGCGGCTTGCACTCGTGTGCCCAAATATTTCCTTCAAAGTTGTTGATATTGAAAGGGAATATGAACTTTTCTGCTCACATTCTGCTGCTTCTCCACTGTCACTTGTAACCACTGGCTTTGGGGTGGAGGTCACAAACTCTCTCCATGAATTAGAAGTTGAAAACAATATCATAAAGCTTGCTGGATACATATCAGGTCCTTGCAATACCCTGGATATGAAGGCCTTACAGTATCTCTATATCAACTCCCAGTTCGTTTGCAAGGGACCTGTTCATAAGCTTTTAAGTCAATTGGCTATTAGGTTTGAGCATCGTAACTCATGGAGTGCTGATAATGAAAGCCAAAACAAAAAGAGAGGCAGATTTCAACCATGCCCGGCATATATCTTGAATTTAAGGTGCCCCCGCTCTTTATATGTTTTGAGCTTTGAGCCGTCAAAAACTTATGTTGAATTCAAGGATTGGGCTCCAATACTAAACTTCATTGAGAAGGTCATCAAACAGTTCTGGGAGAGAAGCATACCTTGTGGAGATTCCTCCAACAAAGCCACTTATATGGCTCAAGAAGATCAACGTGAGAAAGTAGATGCCACCATTTCAGCAAAAGCAGATATATCACAGTTTGGAAGCCAAGATCGTAAGGATTGTTTAGACCTCTTCTTTTCCACTTCAGACAAGCTAAATGAAGATGACAATCATCAGTGCTACAGGGAGGATGTGATAACCTCTGTTGATTACTTACATCAAGGGACAAAGATCCTCAAAGAGAAACAAAATAAGGGAGGCCATCTTCGTCAGACCGGTTATTCTGGCAATTTACTGGATGTTTCTTACGCCAAAAGCATGTCCACCATTATGAAAAAGAGTAACAGTTTTTTGACGTATGATAACAATGATTTATTGCAAGGAGTTCACTTTTTGGATGGTATGTGTCCTGCTGCCGAAAGTTTCTATGATAATATTCCTTCTTATGCAAGAAGTTCTTCACGTGGAAGAAAATTAAATGAAGAAGATGCTGGCGTGATCTGTGAATCATTTGAAGGTTATGAGTGCCATGGGTTCGGTTATGATGTAGAGATTGGTGGGAATTTTCAAAAGCCTTTTCTAAAGAGTTGCTCTACACAAAAAGGTAGTATCCTGAACGAGAAGACTTTGCTTGTAAATGATGAACTTGAACTCCAAACCGATAGCTTTTGGAGTAAGCAAAACCTAGGGGAGGATTTTTGCAGTGGTAGCAAGGATTTATACACCCGTCCCTGTGTAGAAGTTGCAAAAAAATTAAAGATGTCTGAAGATTCTGATTTTCTCGTAAAAGCATGGCCGGGAGAAAATTGTCTCCCTCTAGATTCATGGTATTCAGCAACACAAATATGTAACACTGGTTCTGATGATCGGTTATCAAACTCTGAATGGCATCATGTCTATCAAGAATCCTCATCTCGAGCTACTGCATTGAGTGTTTATCATACCAATGATATTAATGATCTTGAAGAATCATCTAGATGCTATAAAAGAATTCCTCACACACCAATTTTTGATGACGAAAAAAATGGGAACATTTTCAGCTATGATCTTGGAGGAGCATCTAAATGCAGTACAAGGATTACACATATTTTTAACGACGAAGAAAATGGGCACAACTTCAGTTATAACATGTCAAGGAATGCTAACCAGGATCCCTGCACCTCAAGTTTTGCGAATAGTGGATTTAGTTTTGATGGTGCTGTAGAAGCTAAAGAAATATTCAACAGATTGGTTGACTGGCCTGATTTCCATGATACACATTTCACAAAAAGGTCGGATATTTTTAACGAGGAGCCAGACTGCCTATTACCTGAGTCATGTGTTAGAAAATGTAACAGACCCAACATTATAAAAGGCGAAAGGGATCTTTTTAGGCACCCAACTTTGGAAAAGACTCGTGTAAGATCTAAAAGAAGCTTCTCAGCTCCTCCATTTCATAGAAGTAGAAGGAGGTTTTTCTCTTTAAATCAGCCTCCCGAAATGGTAGCTAAAAGACCTACCGGTCTAGCATCCGACCCTGCTTCCAAACTTCTAGAAGCAAGTGATTTTGAATATTCTCAACATCCTCCTGACGTTCTTAGCCCCAACAATGAAGATCTATTGGAAAATCTTAAAACTAATGTGAAACGGAGTTCAGAGGTTCTGGGGGCTACACAGGTTAATGACGCCGCTGAGATTGAAGGGTTTGAAAGTTTCAATGTTCAACAGAATGATCCATTCAGGGAATTGATATCTAGGGAAGTGCAAGATTCCGTAGATTATGGGACTAAACGGAGGAGCTGCGTGCCTCAAACTCCAAAGAATGATAAAATTGATATTCAAAGTCAAAATAATAATATACTTGACATCTCTTCTGGATTCTTGCATCTTGCTGGAGATTCACTGATCCCTGATACTATCAGTAAGAAATGCCTCGAGGATGCCAAAGTTCTTCATCAGGTGGATAAGAAATTCATTCCAATCATGGCTGGCAGAACCCTTGCTGTTATTGATCAGCATGCTGGAGACGAAAGAATCAGACTGGAAGACTTGCGTCAAAAGGTATTATCTGGAGAAGCAAAAGCAATAACCTATCTAGATGCTGAACAGGAGCTGGTACTGCCAGAGATTGGTTATCAACTACTTCATAGTTACAGGGAACAGATTAAAGATTGGGGCTGGATATGTAACATTCATACTCAAAATTCTGAATCCTTTAGAAGGAATTTGGATCTTCTCAACAGACAACAAATGACAATCGCTCTTGTTGCGGTACCATGTATTTTAGGTGTCAATTTAAACGATGTTGATCTTTTAGAGTTTCTTCAGCAGCTAGCTGATACTGACGGATCATCAACAATGCCACCCTCGGTTGTACGACTCCTAAATTCGAAATCGTGCCGAGGTGCAATTATGTTTGGGGATTCATTGCTACCATCAGAATGCTCCCTTTTAGTTGAAGAGCTAAAGCATACATCCCTCTGTTTCCAGTGTGCTCATGGGAGACCAACCACTGTTCCTCTAGTCAACTTGGAGGCACTGCACAATCAAATAGACAAGCTTGGACTGATGAATAAGAGCTCAAGTAACAAGTGGCATGGATTACAAAGACATGAAGTGTCTATTGATCGTGCAGTACAACGTTTAAATTCTGCTAATAGTTGA 3702 0.4009 MATIRPLPESVRSSIRSSFSLFDFTRIVEELVYNSLDARATKVSVFVGIGSCYLKVVDDGGGITRDGLELVGERYATSKFLNLADLNATSENFGFRGEALASISEVSLLEIVTRAYGRPNGYRKVLKGSKCIYLGIDDDRKEVGTTVIVCEIFYNQPVRRKQIQSSPNKVLQSIKKCVMRLALVCPNISFKVVDIEREYELFCSHSAASPLSLVTTGFGVEVTNSLHELEVENNIIKLAGYISGPCNTLDMKALQYLYINSQFVCKGPVHKLLSQLAIRFEHRNSWSADNESQNKKRGRFQPCPAYILNLRCPRSLYVLSFEPSKTYVEFKDWAPILNFIEKVIKQFWERSIPCGDSSNKATYMAQEDQREKVDATISAKADISQFGSQDRKDCLDLFFSTSDKLNEDDNHQCYREDVITSVDYLHQGTKILKEKQNKGGHLRQTGYSGNLLDVSYAKSMSTIMKKSNSFLTYDNNDLLQGVHFLDGMCPAAESFYDNIPSYARSSSRGRKLNEEDAGVICESFEGYECHGFGYDVEIGGNFQKPFLKSCSTQKGSILNEKTLLVNDELELQTDSFWSKQNLGEDFCSGSKDLYTRPCVEVAKKLKMSEDSDFLVKAWPGENCLPLDSWYSATQICNTGSDDRLSNSEWHHVYQESSSRATALSVYHTNDINDLEESSRCYKRIPHTPIFDDEKNGNIFSYDLGGASKCSTRITHIFNDEENGHNFSYNMSRNANQDPCTSSFANSGFSFDGAVEAKEIFNRLVDWPDFHDTHFTKRSDIFNEEPDCLLPESCVRKCNRPNIIKGERDLFRHPTLEKTRVRSKRSFSAPPFHRSRRRFFSLNQPPEMVAKRPTGLASDPASKLLEASDFEYSQHPPDVLSPNNEDLLENLKTNVKRSSEVLGATQVNDAAEIEGFESFNVQQNDPFRELISREVQDSVDYGTKRRSCVPQTPKNDKIDIQSQNNNILDISSGFLHLAGDSLIPDTISKKCLEDAKVLHQVDKKFIPIMAGRTLAVIDQHAGDERIRLEDLRQKVLSGEAKAITYLDAEQELVLPEIGYQLLHSYREQIKDWGWICNIHTQNSESFRRNLDLLNRQQMTIALVAVPCILGVNLNDVDLLEFLQQLADTDGSSTMPPSVVRLLNSKSCRGAIMFGDSLLPSECSLLVEELKHTSLCFQCAHGRPTTVPLVNLEALHNQIDKLGLMNKSSSNKWHGLQRHEVSIDRAVQRLNSANS 1233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01106 1233 ProSitePatterns DNA mismatch repair proteins mutL / hexB / PMS1 signature. 94 100 IPR014762 -
Mepo5g01106 1233 Gene3D - 2 208 IPR036890 -
Mepo5g01106 1233 Pfam MutL C terminal dimerisation domain 995 1156 IPR014790 GO:0005524|GO:0006298
Mepo5g01106 1233 Gene3D - 999 1187 IPR042120 -
Mepo5g01106 1233 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 23 203 IPR036890 -
Mepo5g01106 1233 SUPERFAMILY DNA mismatch repair protein MutL 994 1187 IPR037198 -
Mepo5g01106 1233 SUPERFAMILY Ribosomal protein S5 domain 2-like 219 348 IPR020568 -
Mepo5g01106 1233 SMART MutL_C_2 996 1156 IPR014790 GO:0005524|GO:0006298
Mepo5g01106 1233 FunFam DNA mismatch repair endonuclease MutL 1 212 - -
Mepo5g01106 1233 PANTHER DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL 1 1192 IPR038973 GO:0006298|GO:0016887|GO:0032300|GO:0140664
Mepo5g01106 1233 Pfam DNA mismatch repair protein, C-terminal domain 218 347 IPR013507 GO:0005524|GO:0006298|GO:0030983
Mepo5g01106 1233 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 118 - -
Mepo5g01106 1233 SMART DNA_mis_repair_2 214 349 IPR013507 GO:0005524|GO:0006298|GO:0030983
Mepo5g01106 1233 NCBIfam DNA mismatch repair endonuclease MutL 4 376 IPR002099 GO:0005524|GO:0006298|GO:0030983
Mepo5g01106 1233 Gene3D - 214 354 IPR014721 -
Mepo5g01106 1233 Gene3D - 1040 1151 IPR042121 -
Mepo5g01106 1233 FunFam MUTL protein homolog 3 1040 1151 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01106 K08739 - gmx:100788019 1643.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01106 5 11089716 11099668 Mepo5g01106 5 11089716 11099668 ECH