Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01100 ATGACGGAAACCTTAGAATCCTCCCCCTACCCTCCAATAGACCCAATCAACTTCGATCTTATTATCATCGGCACCGGCCTTTCCGAATCCATCATCTCCGCCGCCGCATCCGCCGTCGGAAAAACCATCCTCCACCTCGATCCCAATCCCTTCTACGGTAGCCATTTTGCTTCTCTCTCCTTCGAAGATCTCATTTCTCACCTCAATTCTCCTCCCAAATACATCACCGCCACCGCCACCACCGACAATTCCGACTACACCACCTTAAATCTCATCCAGCAACCTATATTCTCCGATGCGGAGTTCAATTCATGCAATTCCATCGAAGAATCCCAATTCCTTCGCGAAAATTCGAGAAAATTCAACCTCGATTTAGCAGGACCTAGGGCATTGTTTAGCGCGGACAAAACAATCGATTTGTTGTTGAAATCAGGTGCTGCACAGTACTTAGAATTCAAAGGAATCGATGCGAGTCTTGTTTACAATACGAATGAGGGTTTAGTGAATGTTCCAGATTCACGTGGAGCGATTTTTAGAGATAAGAATCTTTCGCTTAAGGAGAAGAATCAGTTGATGAAGTTTTTTAAGTTTGTTCAGCAACATTTGGGTGGTAATGAGGATGAGAAGATTTCGGAGGAAGATATGGAGAGTTCGTTTGTTAGTTACTTGGAGAAGATTGGTTTGCCGTCAAAGATAAAAGCGATTCTTTTGTATGCTATAGCCATGGTAGATTTTGATCAAGAAAATGGTGGGGTTTGTAAAGATTTACTGAAAACAAAAGATGGAATAGATCGTTTAGCTCAATACAGCTCATCGGTTGGAAGGTATCCCAATGCCCCGGGGGCTTTGCTTTATCCTATTTATGGTGAAGGGGAACTACCACAAGCTTTTTGTCGCCGTGCTGCTGTCAAAGGTTGCATTTATGTTCTCAGAATGCCGGTTATTTCCCTGCTTATAGATAAGGTTACTGGGTCGTATAAGGGTGTTAGATTATCTTCAGGTCAAGATTTATATAGTCATAAGTTAATCCTGGACCCATCCTTCACAATTCCATCAACTCCGTCTTTGTCTCCTAAAGATTTTTCGCTCCAGATGTTGAGTCAGTTAGACATTAAAGGAATGGTTGCTAGGGGAATATGCATCACAAGGAGTTCCATAAAGCCAGATGTATCAAATTGCTCTGTGGTTTATCCTCCTAGATCTCTGTATCCTGATCAGGTTACATCAGTCAGAGCTCTTCAGATAGGATCGAATCTTGCTGTTTGTCCTGCGGACACCTTTGTTTTATACTTTTCCACTTTGTGCAATGATGCCGATGAAGGAAAGAAGTTACTAAAAGCATCCATGAATGCTCTTCTTACACCGCCTGTATCTGGAAACACAGAAAGTTCTCCCAATGTTCAAAGTGGAAGTGAAGATAAAAAACCTGTTGTGCTCTGGAGTACCTTTTATATTCAAAAATTAACTTCGAGTAAATTTGAAGCTATCAGTTCCACTCCGACACCGGATGGAAATCTAAACTACGTTGACCTTTTAGATGAAACTGAGAAGCTATTTGGTCAAATGTACCCCAATGAAGAATTCTTTCCAAAGACTACATCCCCTGAAGATACCATGGATGATGATGATAATGGGATTATTATGGAGAACTAA 1653 0.4162 MTETLESSPYPPIDPINFDLIIIGTGLSESIISAAASAVGKTILHLDPNPFYGSHFASLSFEDLISHLNSPPKYITATATTDNSDYTTLNLIQQPIFSDAEFNSCNSIEESQFLRENSRKFNLDLAGPRALFSADKTIDLLLKSGAAQYLEFKGIDASLVYNTNEGLVNVPDSRGAIFRDKNLSLKEKNQLMKFFKFVQQHLGGNEDEKISEEDMESSFVSYLEKIGLPSKIKAILLYAIAMVDFDQENGGVCKDLLKTKDGIDRLAQYSSSVGRYPNAPGALLYPIYGEGELPQAFCRRAAVKGCIYVLRMPVISLLIDKVTGSYKGVRLSSGQDLYSHKLILDPSFTIPSTPSLSPKDFSLQMLSQLDIKGMVARGICITRSSIKPDVSNCSVVYPPRSLYPDQVTSVRALQIGSNLAVCPADTFVLYFSTLCNDADEGKKLLKASMNALLTPPVSGNTESSPNVQSGSEDKKPVVLWSTFYIQKLTSSKFEAISSTPTPDGNLNYVDLLDETEKLFGQMYPNEEFFPKTTSPEDTMDDDDNGIIMEN 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01100 550 Gene3D Guanine Nucleotide Dissociation Inhibitor, domain 1 170 282 - -
Mepo5g01100 550 PRINTS Rab GDI/REP protein family signature 187 202 IPR018203 GO:0005092|GO:0007264
Mepo5g01100 550 PRINTS Rab GDI/REP protein family signature 37 54 IPR018203 GO:0005092|GO:0007264
Mepo5g01100 550 PRINTS Rab GDI/REP protein family signature 137 153 IPR018203 GO:0005092|GO:0007264
Mepo5g01100 550 PRINTS Rab GDI/REP protein family signature 19 37 IPR018203 GO:0005092|GO:0007264
Mepo5g01100 550 PRINTS Rab GDI/REP protein family signature 289 310 IPR018203 GO:0005092|GO:0007264
Mepo5g01100 550 Pfam GDP dissociation inhibitor 116 449 IPR018203 GO:0005092|GO:0007264
Mepo5g01100 550 Pfam GDP dissociation inhibitor 17 70 IPR018203 GO:0005092|GO:0007264
Mepo5g01100 550 Gene3D Guanine Nucleotide Dissociation Inhibitor, domain 2 95 488 - -
Mepo5g01100 550 PIRSF Rab_ger_ger_transf_A_euk 1 96 IPR001738 GO:0005968|GO:0006886|GO:0018344
Mepo5g01100 550 PIRSF Rab_ger_ger_transf_A_euk 73 550 IPR001738 GO:0005968|GO:0006886|GO:0018344
Mepo5g01100 550 PANTHER RAB GDP-DISSOCIATION INHIBITOR 14 532 IPR018203 GO:0005092|GO:0007264
Mepo5g01100 550 FunFam Rab proteins geranylgeranyltransferase component 170 282 - -
Mepo5g01100 550 MobiDBLite consensus disorder prediction 526 550 - -
Mepo5g01100 550 SUPERFAMILY FAD-linked reductases, C-terminal domain 372 484 - -
Mepo5g01100 550 SUPERFAMILY FAD/NAD(P)-binding domain 15 348 IPR036188 -
Mepo5g01100 550 Gene3D - 15 528 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01100 Mepo-Chr5 11026905 11033237 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01100 K23460 - gmx:100795946 834.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01100 5 11026905 11033237 Mepo5g01100 5 11026905 11033237 ECH