Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01076 ATGCTGAGAACCAACAACAACAACAAGCGCGGATTGCTTACTCACTTCAAATCTCTCATCAACAACTCACGGTGCTTCTGTTCCTCTTCACCCAAACAACCACTGCAATATCATTCCTCTTCAGAAACCGAATCAGATTCCTCACTTTCTCGTGGCCGCATTGACATTTCAGGGAAGACTTTTGATGCATTGAAGCTTGGTGTTACCGGCTGTATGATTTCAAAACCGTCTCACTTTGTCCTCAAACTTCTTCAGGACAAAGGGTTAAAGGCCTACTTAGTAGGTGGGTGTGTGAGAGATCTAGTACTGAATAGAACTCCAAAAGATTTTGATGTGGTCACCACAGCGAAGCTTATAGAGGTGAAGAGGCTGTTTCGTCGTTTCGGTCGTCGTGCTGACGTTGTTGGGCGGCGTTTTCCAGTATGCCTGGTTCATATACAAGGTTCGGCAGTAGAGGTAACCAGTTTTCACACAGAATCAGAAACTCCCAAAGCAATGAAAAAGGTTTTACACTCTCTGCTGCCGAAATGCAAGAATAAAGAACACCGATTCCTCTGCAAAAACGCTTTGCGCAGAGACTTTACAATTAATAGTTTATTTTATGATCCCTTTGCCAATAAAATATACGATTATGCCAATGGAATGGCTGATTTGAGGTCCTTAAAGCTAGAAACCGTGATCCCTGCTCAGTTGTCCTTTAAAGAGGATCCAGGGAGAATTTTGCGTGGCTTCAGAATTGCAGCTCGTCTAGGTTTATCATTATCAAAGGAGATTGAGGCTGCAATCTGGACATGCTCTTCCCTAGTTGAGGACTTGAACAAGGATAGAATGATGATTGAAATGAACTATATGCTGTCTTATGGAGCTGCTGAGCCGTCTCTGCGTTTACTCTGGAAATTCAAGTTGCTTCAATTTTTGCTTCCGGTGCATGCAGCATATCTTGACGAAAAAGCTACTAAAGAAGATGCTCAGGATTCCAATATGTTGATGAAATTATTCTTCCATATGGATAATTTGGTTGGATGCGGTCGACCTTCTGATTGCAAGCTATGGATTGGATTGCTAGCATTTCACCTGGCATTAGTAAATAACCCCCAAGATGCTCTTGTGGTGTGGGCATTTGCTTCTGTTCTATATCATGGAGATTTGGAAGGAGGCATCAAGTTTGCTAAAGAACATGCTAAAATGTCTGTTAACTTTGCACCTGAAATAAAGAGGTCCAGTATATGCAAATCAGATGAAGATATTGCAGAAGCAGTCACTAAATTGGCATCTTTAGCGATTGACTCCATACATGCGCTGGTTAATATTAAAAGTCTTTCTCAATCTCTGTCTAGATATCCATCTGTTCCACCCCCTCACATGGTATTTGTTGTATCAAAGAAAACAGGGCAAGCCGTCTCTGGAATTTTCAAAGTGCTGGTCAATGATATTAAATTTTACAAGAGTGAAAGGAAAAGCACAGAGATAAATTATGACATGCTTGGGAGTGGCCATACTTCAGAGACTAGATTTGTTTTGGGCAAAATTGTTCTTCAAACTATGCGAAGTGGAATCATTGGAGATGGGGATGGTTTTGAGGCTGAAAAATGTCACCCTGACATTGAGAGCACCAAGGATTTTGGCCAATTGGTGACAAGGGAAGATAAAAGAAAGGTGTTATCAACACCAAATTTAGAACATAGGCCAGAAAAGCTGAAGAAACAGAAATTGGCTGAGAATGCATGCATTGAAGAGCAGAAAACTGTTTTGGATGAATTTTATAAGTACAAGGAAACCAATGAAGAGCACCAAAAGCCAGTTAAGTTGCGCCGGGAGATTCATTTATCTATGGTGAACTCTATGCCAAAAAATAAAAGTAATAAAAGAAAACAGTTGATAAATGACGAGAAGAAAATTGCCAGTGCCAGTAAAACTTCTACAGACTATGCCAGGCATCTGAATATAGGTGAACACAGTACATCATCACAATCTACAGTGTCTAAGAATCACCAGGTGATAGCCAATAACCACAACAAAAATGTGGATGTAACAACAGACGAGTCGGTTGACGAAGTTGTCAACGGTAAAGGAAGACAACAACCACAAAAAAGTAAGAAAAGTCGGTCTCCGCTCTCCAGCTTATTCAAGTAA 2133 0.4074 MLRTNNNNKRGLLTHFKSLINNSRCFCSSSPKQPLQYHSSSETESDSSLSRGRIDISGKTFDALKLGVTGCMISKPSHFVLKLLQDKGLKAYLVGGCVRDLVLNRTPKDFDVVTTAKLIEVKRLFRRFGRRADVVGRRFPVCLVHIQGSAVEVTSFHTESETPKAMKKVLHSLLPKCKNKEHRFLCKNALRRDFTINSLFYDPFANKIYDYANGMADLRSLKLETVIPAQLSFKEDPGRILRGFRIAARLGLSLSKEIEAAIWTCSSLVEDLNKDRMMIEMNYMLSYGAAEPSLRLLWKFKLLQFLLPVHAAYLDEKATKEDAQDSNMLMKLFFHMDNLVGCGRPSDCKLWIGLLAFHLALVNNPQDALVVWAFASVLYHGDLEGGIKFAKEHAKMSVNFAPEIKRSSICKSDEDIAEAVTKLASLAIDSIHALVNIKSLSQSLSRYPSVPPPHMVFVVSKKTGQAVSGIFKVLVNDIKFYKSERKSTEINYDMLGSGHTSETRFVLGKIVLQTMRSGIIGDGDGFEAEKCHPDIESTKDFGQLVTREDKRKVLSTPNLEHRPEKLKKQKLAENACIEEQKTVLDEFYKYKETNEEHQKPVKLRREIHLSMVNSMPKNKSNKRKQLINDEKKIASASKTSTDYARHLNIGEHSTSSQSTVSKNHQVIANNHNKNVDVTTDESVDEVVNGKGRQQPQKSKKSRSPLSSLFK 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01076 710 Pfam Poly A polymerase head domain 91 222 IPR002646 GO:0003723|GO:0006396|GO:0016779
Mepo5g01076 710 Pfam Probable RNA and SrmB- binding site of polymerase A 251 313 IPR032828 -
Mepo5g01076 710 SUPERFAMILY Poly A polymerase C-terminal region-like 223 365 - -
Mepo5g01076 710 MobiDBLite consensus disorder prediction 689 710 - -
Mepo5g01076 710 MobiDBLite consensus disorder prediction 667 710 - -
Mepo5g01076 710 Gene3D Beta Polymerase, domain 2 61 220 IPR043519 -
Mepo5g01076 710 PANTHER POLYNUCLEOTIDE ADENYLYLTRANSFERASE FAMILY PROTEIN 24 523 - -
Mepo5g01076 710 CDD NT_ClassII-CCAase 79 219 IPR002646 GO:0003723|GO:0006396|GO:0016779
Mepo5g01076 710 Gene3D - 223 446 - -
Mepo5g01076 710 MobiDBLite consensus disorder prediction 32 51 - -
Mepo5g01076 710 SUPERFAMILY Nucleotidyltransferase 66 219 IPR043519 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01076 Mepo-Chr5 10684416 10691066 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01076 - - tpra:123905643 1036.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01076 5 10684416 10691066 Mepo5g01076 5 10684416 10691066 ECH