Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01016 ATGATGCTCGACGGAACCGAAGATGAAGAGAAGTTCCTCGCCGCCGGCATCGCCGGACTTCAACAGAATTCATTCTACATGCACCGTGCATTGGATTCGAACAATCTCAGAGATGCTTTGAAATATTCTGCTCAGATGCTTTCTGAACTTCGGACTTCTAAGCTTTCTCCTCACAAATACTACGAACTCTATATGCGCGCATTTGATCAATTGAGGAAGCTGGAGATGTTCTTCGAGGAAGAGACTCGTCGCGGTTGCTCCATTATTGATCTTTACGAGCTTGTTCAGCACGCTGGCAACATTTTGCCGCGATTGTATCTCCTCTGTACAGTAGGATCTGTATACATCAAATCGAAGGAAGCTCCTGCTAAGGATGTTCTTAAGGATCTCGTAGAGATGTGTCGTGGCATTCAGAATCCTGTTCGTGGACTCTTTCTCAGAAGCTATCTTTCTCAAGTTAGCAAGGATAAATTGCCGGATATTGGTTCTGAGTACGAGGGGGATGCAGATACTGTGTCAGATGCTGTAGAGTTTGTACTCCAAAATTTCACAGAAATGAACAAACTTTGGGTGCGGATGCAGCATCAGGGGCCTTCCCGGGAGAAGGAGAAACGAGAAAAGGAGAGGAACGAGCTGCGAGATCTTGTTGGGAAGAATCTTCATGTTCTCAGTCAGATAGAGGGTGTTGACCTTGAGATGTACAAAGATGTTGTGCTTCCTAGAGTACTTGAGCAGGTCGTGAATTGCAAAGATGAGTTGGCCCAATTCTACTTGATGGATTGCATAATTCAAGTCTTCCCTGATGAGTACCATTTGCAAACTCTTGATGTGCTGTTGGGCGCTTACCCTCAACTTCAGTCATCTGTTGACATCAAGACAGTACTATCCCAGTTAATGGAAAGGCTTTCAAATTATGCTGCTTCAAGTGCAGAGGTTTTGCCCGAGTTTTTGCAGGTGGAAGCATTTTCCAAATTAAGCAATGCAATTGGCAAGGTCATAGAGGCACAGCCTGACATGCCCACTGCTGGAGTTGTAACTTTATATTCATCTCTTCTTACCTTCACTCTTCATGTCCACCCCGATCGACTAGATTATGCTGATCAAGTCTTGGGAGCATGTGTGAAAAATCTCTCTGGCAAAGGTAAAATTGAGGACAAGGCAGCAACGAAGCAGATTGTTGCTTTATTAAGTGCTCCACTAGAGAAATATAATGACATTATGACTGCCTTGAAGCTTTCAAACTACCCTCGTGTAATGGAATTCCTTGACGTTCCAACTAATAAGGTCATGGCAACTGTTATTATTCAAAGCATTATGAAAAATGGAACACGCATTTCTACCTCTGACAAGGTTGAAGCATTGTTTGAACTGATAAAGGGGCTTATCAAGGATTCTGACGGGACTCCTGATGATGAGTTGGATGAAGATGATTTCAAAGAGGAGCAGAATTCTGTTGCACGTCTGATCCAAATGTTTTATAATGATGATCCAGAAGAGATGTTTAAGATCATTGAAACTGTGAGGAACCACATACTGACTGGAGGACCAAAGCGTCTGCCTTTCACTGTTCCACCTCTAATGTTTTCTTCTTTAAAGTTGGTCAGGCAGTTGCAAGGTCAAAGTCAAAGTCAAGAAGAAAATCCTTTTGGAGATGATGCATCAACATCACCAAAGAAAATCTTTCAGCTTTTAAATCAGACCATCGAGACTCTGTCAGGTGTCCTGGCACCAGAGTTAGCATTGCAGTTGTGCTTGCAATGTGCTGAGGCTGCAAATGACTGTGAGTTGGAACCAGTTGCATATGAATTTTTTACGCAAGCTTATATTCTATACGAAGAAGAAATTTCTGATTCCAGAGCACAGGTCACAGCTATCCATTTAATAATAGGAACTCTTCAAAGGATGCATGTCTTCGGTGTTGAGAACAGGGATACTTTAACTCACAAGGCCACAGGGTATTCAGCAAAGCTTTTAAAGAAGCCAGATCAATGCAGAGCTGTGTATGCATGCTCACATTTGTTTTGGGTTGATGATCATGATAACATGAAAGATGGAGAGAGAGTCCTATTATGCCTTAAGCGGGCCTTAAGGATTGCAAATGCTGCACAACAAATGGCAAATGCAGCACGAGGTAGCACCGGATCAGTAATGCTCTTCATTGAGATTTTGAACAAGTATCTTTACTTCTTTGAGAAGGGAAACCCACAAGTTACAGTTGCTGCTATCCAGGGCCTAATTGAGTTAATTATGAATGAAATGCAAAGTGACACTGCAACTCCAGATCCATCGGCAGATGCTTTCTTAGCAACTACTATGCGCTATATACAGTTCCAAAAACAAAAGGGTGGTACAGTTGGTGAGAAATATGAACCGATCAAGGTTTGA 2385 0.4256 MMLDGTEDEEKFLAAGIAGLQQNSFYMHRALDSNNLRDALKYSAQMLSELRTSKLSPHKYYELYMRAFDQLRKLEMFFEEETRRGCSIIDLYELVQHAGNILPRLYLLCTVGSVYIKSKEAPAKDVLKDLVEMCRGIQNPVRGLFLRSYLSQVSKDKLPDIGSEYEGDADTVSDAVEFVLQNFTEMNKLWVRMQHQGPSREKEKREKERNELRDLVGKNLHVLSQIEGVDLEMYKDVVLPRVLEQVVNCKDELAQFYLMDCIIQVFPDEYHLQTLDVLLGAYPQLQSSVDIKTVLSQLMERLSNYAASSAEVLPEFLQVEAFSKLSNAIGKVIEAQPDMPTAGVVTLYSSLLTFTLHVHPDRLDYADQVLGACVKNLSGKGKIEDKAATKQIVALLSAPLEKYNDIMTALKLSNYPRVMEFLDVPTNKVMATVIIQSIMKNGTRISTSDKVEALFELIKGLIKDSDGTPDDELDEDDFKEEQNSVARLIQMFYNDDPEEMFKIIETVRNHILTGGPKRLPFTVPPLMFSSLKLVRQLQGQSQSQEENPFGDDASTSPKKIFQLLNQTIETLSGVLAPELALQLCLQCAEAANDCELEPVAYEFFTQAYILYEEEISDSRAQVTAIHLIIGTLQRMHVFGVENRDTLTHKATGYSAKLLKKPDQCRAVYACSHLFWVDDHDNMKDGERVLLCLKRALRIANAAQQMANAARGSTGSVMLFIEILNKYLYFFEKGNPQVTVAAIQGLIELIMNEMQSDTATPDPSADAFLATTMRYIQFQKQKGGTVGEKYEPIKV 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01016 794 Gene3D - 465 779 IPR042491 -
Mepo5g01016 794 FunFam Vacuolar protein sorting-associated protein 35 466 779 - -
Mepo5g01016 794 Pfam Vacuolar protein sorting-associated protein 35 13 751 IPR005378 GO:0015031|GO:0030906|GO:0042147
Mepo5g01016 794 PIRSF Retromer_Vps35 2 794 IPR005378 GO:0015031|GO:0030906|GO:0042147
Mepo5g01016 794 SUPERFAMILY ARM repeat 222 756 IPR016024 -
Mepo5g01016 794 PANTHER VACUOLAR SORTING PROTEIN 35 6 794 IPR005378 GO:0015031|GO:0030906|GO:0042147
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01016 Mepo-Chr5 9998858 10010549 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01016 K18468 - gmx:100811902 1434.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01016 5 9998858 10010549 Mepo5g01016 5 9998858 10010549 ECH