Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01006 ATGGTGCTCGAGGCGACAATGATCTGTATTGACAATTCTGAATGGATGCGTAACGGAGATTATTCTCCTTCTCGATTTCAAGCTCAAGCTGATGCTGTTAATCTCATTTGCGGTGCTAAGACTCAGTCGAATCCAGAAAATACAGTTGGAGTTCTTATAATGGCAGGAAAGGGTGTTCGTGTTTTGGTCACGCCTACTAGTGATCTAGGCAAGATATTGGCTTGCATGCATGGACTAGAAATAGGCGGTGAGATGAACCTAGCTGCTGGTATTCAGGTGGCACAATTGGCTCTTAAGCATCGTCAAAATAAAAAGCAACATCAAAGGATTATTGTTTTTGCTGGAAGTCATGTCAAGCATGAAAAGAAAATGTTGGAGATGATAGGGAGAAAGTTGAAAAAGAATAGTGTAGCGCTTGATGTAGTTAACTTTGGCGAAGAAGATGAAGCAAAGACTGAGAAGCTGGAAGCACTTGTTGCAGCTGTGAATAACAATGATACGAGCCATATCGTTCATGTTCCAGCTGGTCCAAATGCTCTTTCTGATGTACTTATAAGTACACCAATTTTCACTGGCGACGGGGAAGGTGGAAGCGGTTTTGCTGCTGCTGCAGCGGCAGCTGCAGCCGGGGGTGGAACTGGATATGATTTTGGTGTGGATCCAAACTTGGATCCTGAATTGGCTCTTGCCTTAAGAGTTTCAATGGAAGAGGAAAGAGCCAGGCAGGAAGCTGCAGCAAAAAAGGCCGCGGAAGATGCTGCCAAACAAGAGAAAGGAGGCTCACAAGATGCGACAATGACCGAGGTTGCCAGTGCATCAACTTCTGAAGCAGAGAATAAGACAACTGATTTGATGGATGATGAGAATGCTCTACTGCAGCAGGCGCTTGCAATGTCAATGGATGACCCTGCGGTTGGCCATGATGTAAGAGATACAGATATGTCAGAAGCATCTGCAGATGACCCTGAGCTGGCACTAGCTCTCCAATTGTCAGTAGCGGATAGTACAAGGGATCAAGCAAGCCAATCAGACGTGACTAGATTGTTGGCAGATCAATCCCGTGTATCTGATATTCTTGCGTCGCTTCCCGGGGTCGACATAAATGACCCTTCCATCAAGGATTTGCTGGCATCCATTCCAAATCAATCTGAGCAGAAGAATGATGACAAGCCATCAAATGAGGAGAAGAAATAA 1194 0.4523 MVLEATMICIDNSEWMRNGDYSPSRFQAQADAVNLICGAKTQSNPENTVGVLIMAGKGVRVLVTPTSDLGKILACMHGLEIGGEMNLAAGIQVAQLALKHRQNKKQHQRIIVFAGSHVKHEKKMLEMIGRKLKKNSVALDVVNFGEEDEAKTEKLEALVAAVNNNDTSHIVHVPAGPNALSDVLISTPIFTGDGEGGSGFAAAAAAAAAGGGTGYDFGVDPNLDPELALALRVSMEEERARQEAAAKKAAEDAAKQEKGGSQDATMTEVASASTSEAENKTTDLMDDENALLQQALAMSMDDPAVGHDVRDTDMSEASADDPELALALQLSVADSTRDQASQSDVTRLLADQSRVSDILASLPGVDINDPSIKDLLASIPNQSEQKNDDKPSNEEKK 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01006 397 Gene3D - 220 305 - -
Mepo5g01006 397 MobiDBLite consensus disorder prediction 242 258 - -
Mepo5g01006 397 Gene3D von Willebrand factor, type A domain 3 186 IPR036465 -
Mepo5g01006 397 SUPERFAMILY vWA-like 4 175 IPR036465 -
Mepo5g01006 397 SMART VWA_4 2 175 IPR002035 -
Mepo5g01006 397 MobiDBLite consensus disorder prediction 362 397 - -
Mepo5g01006 397 SMART uim 287 306 IPR003903 -
Mepo5g01006 397 SMART uim 222 241 IPR003903 -
Mepo5g01006 397 SMART uim 319 338 IPR003903 -
Mepo5g01006 397 FunFam 26S proteasome non-ATPase regulatory subunit 4 3 186 - -
Mepo5g01006 397 Coils Coil 232 257 - -
Mepo5g01006 397 ProSiteProfiles VWFA domain profile. 5 189 IPR002035 -
Mepo5g01006 397 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 222 241 IPR003903 -
Mepo5g01006 397 MobiDBLite consensus disorder prediction 260 279 - -
Mepo5g01006 397 Pfam Ubiquitin interaction motif 224 237 IPR003903 -
Mepo5g01006 397 Pfam Ubiquitin interaction motif 287 302 IPR003903 -
Mepo5g01006 397 Pfam Ubiquitin interaction motif 320 334 IPR003903 -
Mepo5g01006 397 FunFam 26S proteasome regulatory subunit N10 220 301 - -
Mepo5g01006 397 CDD VWA_26S_proteasome_subunit 1 188 - -
Mepo5g01006 397 MobiDBLite consensus disorder prediction 242 282 - -
Mepo5g01006 397 Pfam von Willebrand factor type A domain 6 115 IPR002035 -
Mepo5g01006 397 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4 1 390 IPR027040 GO:0006511|GO:0008540
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01006 Mepo-Chr5 9926742 9932083 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01006 K03029 - gmx:100814594 656.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01006 5 9926742 9932083 Mepo5g01006 5 9926742 9932083 ECH
Mepo5g01006 5 9926742 9932083 Mepo1g02151 1 22107882 22113581 PCT