Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01000 ATGGCTCTATTATTACATAACCAACATTATCCTCAGCCCTTCTTATGCTTCATACTCTTCCTCATTTTCAAAGGGGTTTTAGTTTCAGGGGCAACATTTACATTTATGAACAAGTGTGATTACACAGTATGGCCAGGAATTTATGGAAAACCGGAACTCGGAACTACCGGTTTTGAGCTCACAAAAGGAACTTCCAGAAACTTCCAAGCACCAACTGGTTGGTCAGGTAGATTCTGGGGAAGGACTGGTTGCCAATTCGATGACTCGGGCCACGGAACTTGCTCAACCGCCGATTGTGGCTCCGGAGAAATCTCCTGCAACGGCGCAACAGCCTCACCGCCGGCAACATTAGCTGAATTCACACTAGGAACTGGCTCAATGGACTTCTACGATGTAAGCCTAGTAGACGGTTACAATCTCCCGATGTTGGTTGCCTCGAGTGGCGGTACAGGGCCCTGTGACGTTACAGGCTGCAGTTCAGATCTTAATAAGAAATGTCCGTCAGAGTTGAGGGTGGATGATGGTGGTGCGTGTAATAGTGCTTGTGGCGCGTTTGGGAAACCGGAATATTGTTGTAACGGCGCGTTTAGTAACCCTGACACGTGTAAGCCGTCTGTGTATTCACAAATGTTCAAATCTGAGTGTCCGAAAGCTTATAGTTACGCATATGATGATAAAACCAGCACTTTTACTTGCTCTGGTGCTGATTATACAATCACATTTTGTCCTTCTTCACCAAGTCTAAAGTCTGCAGCCGATTCATCAACTAAAAATCCGAATGAAACGGATAATTCTGCTTCGGGAGCCGACCCGAATCAATCAGAAATGGCTTCAGCTTCATATCTAGCTGATATGGCTACAGCTTCTGGAGCTTCTACTAGAAGCATAACTTCAATGGTTTCTTTGTTGTTGGTGGTGGGTTTCATTTTTACTATTTTTTATGTTTAG 948 0.4473 MALLLHNQHYPQPFLCFILFLIFKGVLVSGATFTFMNKCDYTVWPGIYGKPELGTTGFELTKGTSRNFQAPTGWSGRFWGRTGCQFDDSGHGTCSTADCGSGEISCNGATASPPATLAEFTLGTGSMDFYDVSLVDGYNLPMLVASSGGTGPCDVTGCSSDLNKKCPSELRVDDGGACNSACGAFGKPEYCCNGAFSNPDTCKPSVYSQMFKSECPKAYSYAYDDKTSTFTCSGADYTITFCPSSPSLKSAADSSTKNPNETDNSASGADPNQSEMASASYLADMATASGASTRSITSMVSLLLVVGFIFTIFYV 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01000 315 CDD TLP-PA 32 242 - -
Mepo5g01000 315 ProSiteProfiles Thaumatin family profile. 30 243 IPR001938 -
Mepo5g01000 315 ProSitePatterns Thaumatin family signature. 90 106 IPR017949 -
Mepo5g01000 315 MobiDBLite consensus disorder prediction 251 273 - -
Mepo5g01000 315 PRINTS Pathogenesis-related protein signature 233 242 IPR001938 -
Mepo5g01000 315 PRINTS Pathogenesis-related protein signature 32 44 IPR001938 -
Mepo5g01000 315 PRINTS Pathogenesis-related protein signature 90 119 IPR001938 -
Mepo5g01000 315 PRINTS Pathogenesis-related protein signature 56 65 IPR001938 -
Mepo5g01000 315 PRINTS Pathogenesis-related protein signature 77 88 IPR001938 -
Mepo5g01000 315 PRINTS Pathogenesis-related protein signature 128 144 IPR001938 -
Mepo5g01000 315 SUPERFAMILY Osmotin, thaumatin-like protein 31 244 IPR037176 -
Mepo5g01000 315 PIRSF PR5 4 291 IPR001938 -
Mepo5g01000 315 SMART tha2 33 243 IPR001938 -
Mepo5g01000 315 FunFam THAUMATIN-LIKE PROTEIN 1 31 243 - -
Mepo5g01000 315 Pfam Thaumatin family 37 243 IPR001938 -
Mepo5g01000 315 PANTHER OS03G0233200 PROTEIN 19 243 IPR001938 -
Mepo5g01000 315 Gene3D Thaumatin 31 243 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01000 Mepo-Chr5 9891338 9893326 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01000 18 256 Receptor kinase-like Gene Family AT5G38280 47.843 5.60e-71 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01000 - - mtr:11428451 637.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01000 5 9891338 9893326 Mepo5g01000 5 9891338 9893326 ECH
Mepo1g02137 1 22017453 22019022 Mepo5g01000 5 9891338 9893326 ECH
Mepo2g02473 2 34486255 34490400 Mepo5g01000 5 9891338 9893326 ECH