Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00998 ATGGCTGCTGCAGTAACAGCCGCCGTCTCTTTTCCATACTCCAACTCCACTTCTCTTCCGATCAGGACATCTGTTATTTCCCCAGATAGACTTGTCTTCAAAAAGGTTTCATTGAATAATGTTTCCATAAGTGGAAGGTTAACCGTCAGAGCCGAAGTTGCGACAGAAGCACCTGCTCCTGTTAAGGTTGAAAAGATATCAAAGAAACAGGAGGAAGGTATTGTTGTGAACAAGTTCAAACCAAAGACACCATACATTGGGAGGTGTCTTCTCAACACAAAGATCACTGGTGATGATGCACCTGGTGAAACTTGGCACATGGTTTTCAGCACTGAGGGAGAGGTTCCTTACAGAGAAGGACAATCAATTGGGATAGTTCCAGATGGTATTGACAAGAATGGAAAGCCTCACAAGCTGAGATTGTATTCAATTGCTAGCAGTGCCATTGGTGATTTTGGAGACTCCAAAACTGTTTCTCTATGTGTGAAACGTCTTGTGTACACAAATGATGCTGGAGAAGTTGTTAAGGGAGTCTGCTCAAATTTCTTGTGCGACTTGAAGCCTGGATCTGAAGTACAGATTACTGGCCCAGTTGGTAAAGAAATGCTTATGCCAAAAGATCCTAATGCCACCGTCATCATGTTGGGAACTGGTACTGGAATTGCCCCATTCCGCTCATTTTTATGGAAAATGTTCTTCGAGAAGCATGAAGATTACAAGTTCAATGGTTTGGCATGGCTCTTCTTGGGTGTCCCCACAAGCAGCTCACTGCTTTATAAGGAGGAATTTGAAAAGATGAAGGAGAAAGCACCTGAGAACTTCAGGCTCGACTTTGCTGTGAGCAGAGAACAAGTAAATGACAAAGGAGAGAAAATGTACATCCAAACCAGAATGGCTCAATATGCAGAAGAGTTGTGGGAATTGCTGAAGAAAGACAACACTTTTGTTTACATGTGTGGACTGAAAGGAATGGAAAAGGGAATTGATGACATAATGGTTTCACTTGCTGCCAAAGACGGTATTGATTGGATTGAGTACAAGAGATCGTTGAAGAAGGCAGAGCAATGGAATGTTGAAGTCTATTGA 1086 0.4254 MAAAVTAAVSFPYSNSTSLPIRTSVISPDRLVFKKVSLNNVSISGRLTVRAEVATEAPAPVKVEKISKKQEEGIVVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYREGQSIGIVPDGIDKNGKPHKLRLYSIASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDLKPGSEVQITGPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWELLKKDNTFVYMCGLKGMEKGIDDIMVSLAAKDGIDWIEYKRSLKKAEQWNVEVY 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00998 361 PIRSF FNR-PetH 4 361 IPR035442 GO:0016491
Mepo5g00998 361 FunFam Ferredoxin--NADP reductase, chloroplastic 66 198 - -
Mepo5g00998 361 SUPERFAMILY Riboflavin synthase domain-like 66 203 IPR017938 -
Mepo5g00998 361 Gene3D Translation factors 52 198 - -
Mepo5g00998 361 Pfam Oxidoreductase NAD-binding domain 214 328 IPR001433 GO:0016491
Mepo5g00998 361 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 207 361 IPR039261 -
Mepo5g00998 361 CDD CYPOR_like_FNR 77 361 - -
Mepo5g00998 361 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 140 147 IPR001709 GO:0016491
Mepo5g00998 361 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 291 307 IPR001709 GO:0016491
Mepo5g00998 361 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 213 232 IPR001709 GO:0016491
Mepo5g00998 361 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 255 266 IPR001709 GO:0016491
Mepo5g00998 361 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 315 323 IPR001709 GO:0016491
Mepo5g00998 361 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 243 252 IPR001709 GO:0016491
Mepo5g00998 361 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 177 186 IPR001709 GO:0016491
Mepo5g00998 361 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 117 127 IPR001709 GO:0016491
Mepo5g00998 361 PIRSF Frd-NADP+_RD 1 361 IPR015701 GO:0016491
Mepo5g00998 361 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 82 204 IPR017927 GO:0016491
Mepo5g00998 361 PANTHER - 4 361 IPR015701 GO:0016491
Mepo5g00998 361 FunFam Ferredoxin--NADP reductase, chloroplastic 199 361 - -
Mepo5g00998 361 Gene3D - 199 361 IPR039261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00998 Mepo-Chr5 9844474 9848261 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00998 K02641 - gmx:100798467 658.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00998 5 9844474 9848261 Mepo5g00998 5 9844474 9848261 ECH