Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00996 ATGGGTGACATAGTGAAACAAATATTAGCAAAACCGATCCAGCTAGCAGACCAAGTAACAAAAGCAGCAGATGAAGCAAGTTCATTCAAACAAGAATGTTCTGAGCTCAAATCCAAAACAGAAAAACTCGCTACGCTTCTCCGGCAAGCAGCAAGAGCTAGCTCCGATCTCTACGAACGTCCAACAAAACGGATCATCGAAGAAACAGAACAAGTTCTCGATAAAGCACTTTCATTAGTCCTAAAATGTCGTGCTAATGGTCTCATGAAACGTGTCTTCACCATCATACCAGCTGCAGCCTTCCGTAAAACATCCTCCCATCTAGAAAACTCTATTGGTGATGTTTCATGGCTTCTTCGAGTATCTGCCCCCGCTGATGATCGCGGGGGTGAGTATCTTGGACTGCCACCAATAGCAGCCAATGAACCTATATTATGTTTTATATGGGAGCAGATCGCTATGTTATTCACCGGTTCACAAGAAGTTCGTTCGGATGCAGCTGCTTCGCTTGTGTCATTGGCACGAGGTAGTGACCGATACGGGAAGCTTATAATTGAAGAAGGTGGGGTTGGTCCACTTTTGAAGCTGATCAAGGAAGGGAAAGCTGATGGACAAGAGAATGCTGCTAGAGCTATTGGTCTGCTTGGGCGTGACGCGGAGAGCGTTGAACATATGATACATGTTGGTGTTTGTTCTGTTTTCGCGAAAATTCTTAAAGAAGGTCCTATGAAAGTTCAAGGTGTTGTTGCTTGGGCTGTTTCTGAACTTGCTGCTAATTATCCTAAATGTCAGGAACTTTTTGCTCAGCATAATATTATTAGGTTGCTTGTTGGTCATTTAGCTTTTGAAACTGTTGAGGAACATAGTAAGTATGCTATTGTTAGTATGAAAGCGAATTCAATTCACGCCGCTGTTGTTATGGCTAGTAATAATAATAATTCCAGCTCTAATCTTAATCCCAAGAAGGGAACTGAAAATGAAGATGGTGTTGTTGTTGTTGGTGGCAATAAACATGGTCGTGTATCGCATCATCCATTAGGTGAAAGACCAAGAAATCTGCATAGAGTGATCACAAGTACTATGGCAATTCATGCTGCTTCCAAGCAGCCCAATGAAGGAAATGAAGCAAATCAAAATCAGAACATTTTGGCCAATTCCAATACTCCTAATGGTAATGGACTTGGTAATGGTAATGGTAATGATGGTGGGAAGCAAGGAAATCATAATAATCATCAGAGAAATTATTCGCATTCGGGGATTAACATGAAGGGAAGGGAATTTGAAGATGCTGAGACAAAGGCAAGTATGAAGGAAATGGCAGCAAGAGCTCTATGGCATTTGGCTAAAGGTAATGTGGCGATTTGTCGAAGCATTACGGAATCAAGGGCTTTGTTGTGTTTTTCTGTTTTGCTTGAGAAAGGACCAGAGGCTGTGCAATACAATTCCGCAATGGCATTGATGGAGATTACTGCGGTGGCTGAGAAAGATGCTGAATTGAGGAAATCTGCATTCAAGCCTAACTCACCTGCCTGCAAAGCAGTTGTTGATCAAGTGCTTAAGATAATTGAGAAAGCAGATTCGGATCTTCTCATACCGTGTGTCAAAGCGATTGGGAATTTGGCAAGGACATTCAAGGCTACTGAGACAAGGATGATCGGTCCATTGGTAAAACTTCTTGATGAAAGAGAGGCAGAGGTTTCCAGGGAGGCATCAATCGCGCTTAGGAAATTTGCCGGCAATGAAAACTACCTTCATGTTGATCACTCCAAGGCAATTATCAGTGCCGGTGGGGCAAAACACTTGATTCAGCTTGTGTATTTTGGAGAGCAAATGGTTCAGATTCCAGCATTGGTTCTGCTCTCTTACATTGCATTGCACGTGCCGGATAGCGAGGAACTTGCTCTGGCTGAGGTGCTTGGAGTGCTTGAATGGGCATCCAAGCAATCATTCATGCAACATGATGAAACCCTTGAAGAATTGTTGCAAGAAGCCAAGAGTAGGTTGGAGCTTTATCAGTCTAGAGGTTCAAGAGGATTCCATCATAAATTGCATCAGTAG 2058 0.4281 MGDIVKQILAKPIQLADQVTKAADEASSFKQECSELKSKTEKLATLLRQAARASSDLYERPTKRIIEETEQVLDKALSLVLKCRANGLMKRVFTIIPAAAFRKTSSHLENSIGDVSWLLRVSAPADDRGGEYLGLPPIAANEPILCFIWEQIAMLFTGSQEVRSDAAASLVSLARGSDRYGKLIIEEGGVGPLLKLIKEGKADGQENAARAIGLLGRDAESVEHMIHVGVCSVFAKILKEGPMKVQGVVAWAVSELAANYPKCQELFAQHNIIRLLVGHLAFETVEEHSKYAIVSMKANSIHAAVVMASNNNNSSSNLNPKKGTENEDGVVVVGGNKHGRVSHHPLGERPRNLHRVITSTMAIHAASKQPNEGNEANQNQNILANSNTPNGNGLGNGNGNDGGKQGNHNNHQRNYSHSGINMKGREFEDAETKASMKEMAARALWHLAKGNVAICRSITESRALLCFSVLLEKGPEAVQYNSAMALMEITAVAEKDAELRKSAFKPNSPACKAVVDQVLKIIEKADSDLLIPCVKAIGNLARTFKATETRMIGPLVKLLDEREAEVSREASIALRKFAGNENYLHVDHSKAIISAGGAKHLIQLVYFGEQMVQIPALVLLSYIALHVPDSEELALAEVLGVLEWASKQSFMQHDETLEELLQEAKSRLELYQSRGSRGFHHKLHQ 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00996 685 SMART arm_5 218 258 IPR000225 GO:0005515
Mepo5g00996 685 SMART arm_5 451 491 IPR000225 GO:0005515
Mepo5g00996 685 SMART arm_5 507 542 IPR000225 GO:0005515
Mepo5g00996 685 SMART arm_5 177 217 IPR000225 GO:0005515
Mepo5g00996 685 SMART arm_5 585 625 IPR000225 GO:0005515
Mepo5g00996 685 Coils Coil 654 674 - -
Mepo5g00996 685 PANTHER ARMADILLO REPEAT ONLY 4 1 676 - -
Mepo5g00996 685 Gene3D - 3 121 IPR036537 GO:0007166
Mepo5g00996 685 Pfam Armadillo/beta-catenin-like repeat 183 214 IPR000225 GO:0005515
Mepo5g00996 685 FunFam Armadillo repeat only 2 150 319 - -
Mepo5g00996 685 Gene3D - 428 503 IPR011989 -
Mepo5g00996 685 Gene3D - 148 320 IPR011989 -
Mepo5g00996 685 MobiDBLite consensus disorder prediction 368 419 - -
Mepo5g00996 685 Coils Coil 36 56 - -
Mepo5g00996 685 Gene3D - 504 662 IPR011989 -
Mepo5g00996 685 SUPERFAMILY ARM repeat 152 642 IPR016024 -
Mepo5g00996 685 FunFam Armadillo repeat only 4 2 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00996 Mepo-Chr5 9825905 9827962 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00996 - - mtr:11433980 1243.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00996 5 9825905 9827962 Mepo5g00996 5 9825905 9827962 ECH
Mepo1g02135 1 21965411 21968176 Mepo5g00996 5 9825905 9827962 PCT