Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00945 ATGCTTAGCGCCACAAAACGCGTCACTGCGTTCCTCCCTCGGAATCTTCAACCATTCCGTCAACTCCATGAAGACATCGAAGAAAGCATATATTTCTACAAGAGCAGAGGCCAACATATTCTCACCAACCCTCGTATTCTGGACACCATTGTTCAAAAATCCGCAATTCACCCTTCCGATACGGTCCTCGAGATCGGTCCCGGCACCGGAAACCTCACCCTCAAGCTTCTAGAAGCTTCACGCGAGGTTGTAGCCATCGAAATCGATCAACGTATGATTAACATTCTCGAGAATCGTGCCATGAAACGCGGCCTCCACAACAAGCTATCGGTGATAACAAAAGATGCATTGAGAACAGAGTTCCCACCGTTCGATCTCGTGGTAGCCAATATCCCTTACGGCATATCATCACCACTCATAATTAAACTTATATATGAGACGACACCATTTCGAAGCGCGACTCTTCTACTTCAAAAAGAGTTCGCTCGAAGATTACTGGCTAATCCCGGTGATTCTGAATTTAACCGTTTAGCCGTTAATGTTAAGCTTTTAGCTGACGTGGAATTTGTCATGGATGTAAGCAAAAGAGATTTTCTTCCGTCACCTAAAGTTGATTCCTCCGTCGTTATAATTCGACCAAAGGTTAACGTTCCTGCCGTTAATCTTTGCCAGTGGAGGGCTTTCACTAGGACTTGTTTTAATAACAAGAATAAGACACTTGGTGCTACGTTTAAGAATAAGAGGAAAGTTTTGGAGTTGTTGGAATTTAATAATGTGTCTGGTTTGGTTGGAGAACAAGATGATGTTTGTTTGTTTAAGGAGAAGATTGTTGGAGTTCTTAGAGAGGGAGGGTTTGATGATAAAAGGCCGTCGAAACTTTCGATTGAAGAGTTATTGCATTTGTTGTCTTTGTTTAATGAGGTTGGTGTATATTTTGATCACCGTGAGGATGATAGGAATGAAAATGATAGGTTTGAGGTTGATGATTAG 990 0.4222 MLSATKRVTAFLPRNLQPFRQLHEDIEESIYFYKSRGQHILTNPRILDTIVQKSAIHPSDTVLEIGPGTGNLTLKLLEASREVVAIEIDQRMINILENRAMKRGLHNKLSVITKDALRTEFPPFDLVVANIPYGISSPLIIKLIYETTPFRSATLLLQKEFARRLLANPGDSEFNRLAVNVKLLADVEFVMDVSKRDFLPSPKVDSSVVIIRPKVNVPAVNLCQWRAFTRTCFNNKNKTLGATFKNKRKVLELLEFNNVSGLVGEQDDVCLFKEKIVGVLREGGFDDKRPSKLSIEELLHLLSLFNEVGVYFDHREDDRNENDRFEVDD 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00945 329 SMART rADcneu6 46 215 IPR020598 GO:0000154|GO:0000179|GO:0008649
Mepo5g00945 329 Gene3D - 219 314 - -
Mepo5g00945 329 Hamap Ribosomal RNA small subunit methyltransferase A [rsmA]. 30 306 IPR011530 GO:0000179|GO:0006364
Mepo5g00945 329 PANTHER DIMETHYLADENOSINE TRANSFERASE 25 307 IPR001737 -
Mepo5g00945 329 NCBIfam 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA 32 303 IPR011530 GO:0000179|GO:0006364
Mepo5g00945 329 FunFam rRNA adenine N(6)-methyltransferase 32 216 - -
Mepo5g00945 329 CDD AdoMet_MTases 61 144 - -
Mepo5g00945 329 ProSitePatterns Ribosomal RNA adenine dimethylases signature. 62 89 IPR020596 GO:0000154|GO:0000179|GO:0008649
Mepo5g00945 329 Gene3D Vaccinia Virus protein VP39 32 216 IPR029063 -
Mepo5g00945 329 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 27 308 IPR029063 -
Mepo5g00945 329 Pfam Ribosomal RNA adenine dimethylase 34 254 IPR001737 -
Mepo5g00945 329 ProSiteProfiles rRNA adenine N(6)-methyltransferase family profile. 32 309 IPR001737 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00945 Mepo-Chr5 9153141 9156004 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00945 K14191 - gmx:100790908 412.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00945 5 9153141 9156004 Mepo5g00945 5 9153141 9156004 ECH