Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00939 ATGGCAGATTCATCAGAAGAGGGACAAGTAATTAGCGTTCACAACGTTGATGCATGGAACGATATCCTTTATAGGGGCAATGAATCTAAGAAACTGATTGTTGTGGATTTTACTGCATCTTGGTGTGGACCATGCCGTTTCATTGCACCATTCCTTGCTGAATTGGCCAAGAAGTATACAAATGCCATATTCCTTAAGGTGGATGTGGACGAATTAAAGTCTGTTGCTCAAGATTGGGCTGTTGAGGCGATGCCAACTTTTGTGTTTGTGAAAGAAGGAACAATTTTGAGCAAAGTGGTAGGAGCAAAGAAAGATGAGCTGACTCAGACAATAGAGAAACATGTGGCATCATCAAATGTTTAA 363 0.4077 MADSSEEGQVISVHNVDAWNDILYRGNESKKLIVVDFTASWCGPCRFIAPFLAELAKKYTNAIFLKVDVDELKSVAQDWAVEAMPTFVFVKEGTILSKVVGAKKDELTQTIEKHVASSNV 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00939 120 ProSitePatterns Thioredoxin family active site. 34 52 IPR017937 -
Mepo5g00939 120 PANTHER THIOREDOXIN 10 113 - -
Mepo5g00939 120 FunFam Thioredoxin 9 116 - -
Mepo5g00939 120 Pfam Thioredoxin 13 113 IPR013766 -
Mepo5g00939 120 SUPERFAMILY Thioredoxin-like 6 117 IPR036249 -
Mepo5g00939 120 CDD TRX_family 28 112 - -
Mepo5g00939 120 ProSiteProfiles Thioredoxin domain profile. 1 116 IPR013766 -
Mepo5g00939 120 Gene3D Glutaredoxin 2 119 - -
Mepo5g00939 120 PRINTS Thioredoxin family signature 41 50 - -
Mepo5g00939 120 PRINTS Thioredoxin family signature 80 91 - -
Mepo5g00939 120 PRINTS Thioredoxin family signature 33 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00939 Mepo-Chr5 9108356 9110586 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00939 K03671 - gmx:100499701 209.534
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00939 5 9108356 9110586 Mepo5g00939 5 9108356 9110586 ECH