Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00930 ATGTCAGAACCTTTGGCTTCTGGGAATGGATCTTTTAAGAAGAAAGCAATGAATGCCTCAAACATTCTCAGGAATTCTTTGGCAAAAAAGGGTAGGCGAAGTAGTAAGGTCATGTCTGTTGAAATTGAGGATGTTCATGATGCCGAGGAGTTGAAAGCTGTTGAAGAATTCCGTCAAGCTCTTATATCGGATGACCTCCTCCCTGCGAAACATGATGACTATCATATGCTGCTTAGATTCCTCAAGGCCAGGAAATTCGAAATTGATAAATCAAAGCTGATGTGGTCTGACATGCTGAAATGGAGGAAGGAATTCGGTGCTGACACTATTGCGGAGGAATTTGAATTCAAGGAAATTGATGAAGTATTGAAATATTATCCACAAGGACATCATGGTGTGGATAAAGAAGGACGACCTGTGTACATAGAAAGATTAGGACAAGTCGATGCGACCAAGATGATGCAAGTCACAACCATGGATCGCTATATCAAATACCATGTAAAGGAGTTTGAGAGGACATTCGATGTAAAGTTTGCAGCTTGTTCCATTGCTGCCAAGAAGCACATCGATCAAAGTACGACTATCCTGGATGTGGAGGGAGTGGGGCTTAAAAGCTTCAGCAAACATGCTAGGGAACTTGTTACTCGCATTCAGAAGGTTGATGGTGACAACTATCCAGAGACCTTGAATCGCATGTTCATCATCAATGCAGGTTCTGGATTTAGAATACTGTGGAACACTGTAAAATCCTTCCTTGATCCCAAGACCACAGCAAAAATCAATGTTCTTGGCAACAAGTACGATAGTAAGTTGCTTGAAGTAATTGACGAAAGTGAATTGCCCGAGTTTTTAGGAGGTAAATGTAAATGTGCTGATGAAGGAGGATGTATGCGTTCGGATAAGGGCCCATGGAAAGATCCTGAAATTCTGAGGTTGGTTGAGAATGGGGCTCACAAATGTTCAAAAAAATCTGAGTCTAATGTTGACGAAGAGAAAACAACTTCTAAGGACCACACGGCTTCCAAGGTGGAGGAAAATCTCACAACATCACAAGTTTCTCCGATTTCTGAAGAGGTCCCTGCTACTAAAGCTTCCAAGCACGTTGATCCAATCCCGGTAGATGATAAAAAAACTGCTCAGAAAAAAGTTGACGAGATAGACCCAATGGCAACATCAGAAGAATTTGTGACTGTCATGAAACGCATGACTGAGTTGGAACAGAAAATGACAACCATTAATCATCAGCCTGTTTTAATGCCACCTGAGAAGGAGGAAATGCTACATAATACTATTAATCGAGCTGATTTATTGGAAAAAGAACTGTTGGCCACCAAGAAGGCTTTAGAGGATTCACTGGTTAAGCAAGAGGAGATTTCGGCTTATGTTGAGAAGAAAAAACAGAATAGAAGAAAGTGTTTTTGTTTCTGGTAA 1431 0.4102 MSEPLASGNGSFKKKAMNASNILRNSLAKKGRRSSKVMSVEIEDVHDAEELKAVEEFRQALISDDLLPAKHDDYHMLLRFLKARKFEIDKSKLMWSDMLKWRKEFGADTIAEEFEFKEIDEVLKYYPQGHHGVDKEGRPVYIERLGQVDATKMMQVTTMDRYIKYHVKEFERTFDVKFAACSIAAKKHIDQSTTILDVEGVGLKSFSKHARELVTRIQKVDGDNYPETLNRMFIINAGSGFRILWNTVKSFLDPKTTAKINVLGNKYDSKLLEVIDESELPEFLGGKCKCADEGGCMRSDKGPWKDPEILRLVENGAHKCSKKSESNVDEEKTTSKDHTASKVEENLTTSQVSPISEEVPATKASKHVDPIPVDDKKTAQKKVDEIDPMATSEEFVTVMKRMTELEQKMTTINHQPVLMPPEKEEMLHNTINRADLLEKELLATKKALEDSLVKQEEISAYVEKKKQNRRKCFCFW 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00930 476 Gene3D - 106 317 IPR036865 -
Mepo5g00930 476 CDD SEC14 119 287 IPR001251 -
Mepo5g00930 476 FunFam SEC14 cytosolic factor 106 318 - -
Mepo5g00930 476 SUPERFAMILY CRAL/TRIO N-terminal domain 47 113 IPR036273 -
Mepo5g00930 476 MobiDBLite consensus disorder prediction 362 382 - -
Mepo5g00930 476 MobiDBLite consensus disorder prediction 344 358 - -
Mepo5g00930 476 SUPERFAMILY CRAL/TRIO domain 118 311 IPR036865 -
Mepo5g00930 476 SMART sec14_4 118 289 IPR001251 -
Mepo5g00930 476 MobiDBLite consensus disorder prediction 320 343 - -
Mepo5g00930 476 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 10 466 - -
Mepo5g00930 476 MobiDBLite consensus disorder prediction 320 382 - -
Mepo5g00930 476 SMART CRAL_TRIO_N_2 73 98 IPR011074 -
Mepo5g00930 476 Pfam CRAL/TRIO domain 124 286 IPR001251 -
Mepo5g00930 476 Gene3D - 28 105 - -
Mepo5g00930 476 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 118 292 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00930 Mepo-Chr5 9039628 9043478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00930 77 283 Acyl Lipid Metabolism Gene Families AT5G47730 29.665 9.28e-19 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00930 K26544 - gmx:100527533 744.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00930 5 9039628 9043478 Mepo5g00930 5 9039628 9043478 ECH