Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00899 ATGTCCGCCGCTAAATTAACCTCATGCCTCGCCGCAGCCACCGCCGCCGCAGCGGCTTCAATCTCCTCGCAATCCAATCCCGCTTACTCCGAATCTTTCTTCCGTTTCCCCTTTTTCTCTTCTTCACCTTCCAATTCACCTCCTCCAACGGACCAATCATCTGATAACAAATCGGATTCACCGCCGCCGGCGGAAGAACCTAATAAGTCCGGTTTTGATCCTGAATCGTTAGAAAGAGCTGCTAAAGCTCTCCGTGAAATCAATAATTCTCCTCACGCTAAAAAGGTGTTTGATTTAATGCGTAAACAAGAACAATCTCGTCTTGCTGAGTTAGATGCTGAAAAAGTTAATTATGAACTTATTCAGACTCAAGGAGATATTGATAGGTTGCGTAAAATGGCTGAAGAACAACGCAATCTAATACAAGAGCAGAACCAGAGGCAGGCTCAGGTGTTACGATTTGAAGATGAATTGGCAAGGAAAAGAATGCAGACAGATCATGAAGATCAAAGGCGACATAATGTTGAGTTGGTCCAGATGCAAGAGAAGTCTTTTGTACGAAAGGAGCAGGCAAGAAAGGATTCCGAAGAACAGATGCAAGCTCAGAAACGTCAGACTGAGCAAAAGAAAGCGGAAATAGACAAAGAAACCATTAGAGCTAAGGAAAAGGCAAAGGCTGAAAAACGAATCCTTTTAACGGTATTGACAGAGGAGCAAAACAGGAGAGAGCTTAAAGACAAACTGCAGGGGGAAACAGATAAATGGATTGCTGCAATTAATGCTACTTTTAGTCATATTGAAGGTGGTCTAAGGATATTATTGACCGATAGGGACAAATTGCTTATGACTGTTGGTGGAGCTACTGCATTAGCTGCAGGAGTATATACGACGAGAGAAGGCGCAAAAGTAACATGGGGATATATTAATCGGATTCTGGGGCAGCCATCATTGATCCGGGAATCATCAATGGCAAAGTTTCCAGGATCAAGGATCATGTCTCAAGCCAAAAATAAAGTTTTAAATTATAGTACCTTGGCCAGGGAAAAAAAGTCTGTTGGGATTCAAAATGGTCTTGGAAATGTAATCTTGCATCCCTCATTGCAGAGAAGAATAGTGCATTTAGCACGGGCAACATCAAACACGAAGGCCCATCAGGCACCGTTTCGTAATATGCTTTTTTATGGGCCTCCTGGGACTGGTAAAACCATGGTTGCAAGGGAAATAGCTAGAAAATCGGGTTTGGATTATGCAATGATGACTGGAGGAGATGTTGCACCTCTGGGCCCACAGGCGGTTACCAAAATTCACGAGATATTTGATTGGGCCAAGAAATCTAAAAGAGGCCTGTTGCTTTTTATTGACGAGGCAGATGCTTTCCTTTGCGAGCGTAATAGCTCACACATGAGTGAAGCTCAACGAAGTGCCCTAAATGCATTGCTTTTCAGAACTGGTGATCAGTCTAGAGACATAGTACTTGTGCTTGCAACAAACAGACCAGGAGATCTTGATAGTGCAATTACTGATCGCATTGATGAAGTGATTGAATTCCCACTTCCAGGAGAGGATGAACGTCTTAAGTTATTGAATCTCTATTTGAACAAGTATCTATGTGATGAAAGTAATGGCTCCAAGGGGGGATTATTTATGAAGAAGCAGCCCCAGCAAATTACCATAAAAGATTTATCAGAAGACGTGCTGAAAGAGGCTGCCAAGAAAACAGAGGGATTTTCTGGCCGTGAGATAGCCAAACTCATGGCCAGCGTCCAAGCTGCTGTCTATGGGCGTCCTGACTGCGCCTTGGATTCTAAGTTGTTTAGAGAAATTGTTGATTACAAGGTGGTGGAACATCATCAGCGGTTAAAACTGGCAGCTGAAGGCGGCCTCCCTGCCTGA 1893 0.4363 MSAAKLTSCLAAATAAAAASISSQSNPAYSESFFRFPFFSSSPSNSPPPTDQSSDNKSDSPPPAEEPNKSGFDPESLERAAKALREINNSPHAKKVFDLMRKQEQSRLAELDAEKVNYELIQTQGDIDRLRKMAEEQRNLIQEQNQRQAQVLRFEDELARKRMQTDHEDQRRHNVELVQMQEKSFVRKEQARKDSEEQMQAQKRQTEQKKAEIDKETIRAKEKAKAEKRILLTVLTEEQNRRELKDKLQGETDKWIAAINATFSHIEGGLRILLTDRDKLLMTVGGATALAAGVYTTREGAKVTWGYINRILGQPSLIRESSMAKFPGSRIMSQAKNKVLNYSTLAREKKSVGIQNGLGNVILHPSLQRRIVHLARATSNTKAHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGPQAVTKIHEIFDWAKKSKRGLLLFIDEADAFLCERNSSHMSEAQRSALNALLFRTGDQSRDIVLVLATNRPGDLDSAITDRIDEVIEFPLPGEDERLKLLNLYLNKYLCDESNGSKGGLFMKKQPQQITIKDLSEDVLKEAAKKTEGFSGREIAKLMASVQAAVYGRPDCALDSKLFREIVDYKVVEHHQRLKLAAEGGLPA 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00899 630 MobiDBLite consensus disorder prediction 40 63 - -
Mepo5g00899 630 Coils Coil 101 121 - -
Mepo5g00899 630 FunFam ATPase family AAA domain-containing protein 3 345 535 - -
Mepo5g00899 630 Pfam ATPase family AAA domain-containing protein 3, N-terminal 53 319 IPR021911 -
Mepo5g00899 630 ProSitePatterns AAA-protein family signature. 490 509 IPR003960 GO:0005524|GO:0016887
Mepo5g00899 630 SMART AAA_5 387 520 IPR003593 GO:0016887
Mepo5g00899 630 MobiDBLite consensus disorder prediction 40 78 - -
Mepo5g00899 630 Coils Coil 234 254 - -
Mepo5g00899 630 PANTHER PUTATIVE ATP-ASE 19 625 - -
Mepo5g00899 630 Gene3D - 331 537 IPR027417 -
Mepo5g00899 630 Coils Coil 127 147 - -
Mepo5g00899 630 Coils Coil 185 223 - -
Mepo5g00899 630 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 376 613 IPR027417 -
Mepo5g00899 630 Pfam ATPase family associated with various cellular activities (AAA) 391 518 IPR003959 GO:0005524|GO:0016887
Mepo5g00899 630 MobiDBLite consensus disorder prediction 181 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00899 Mepo-Chr5 8800210 8806483 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00899 389 594 Miscellaneous Gene Families AT5G53170 31.628 2.66e-14 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00899 K17681 - gmx:100777755 935.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00899 5 8800210 8806483 Mepo5g00899 5 8800210 8806483 ECH