Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00866 ATGAAGTGCCCATACTGTTCAGCGGCGCAGGGGCGTTGCACCACAACAACCACCGGAAAACTAATCACAGAATGTACATCATGCGGCCGCGTCGTAGAAGAACGACAATCCCATCCCCACCACATCTTCCACCTGCGCGCCCAAGATAATCCCTTATGCCTCGTCACACCAGATCTCCCTCCCCCCACTCTCAACCAAACCAACACCGAAATCAACGAAGAAGAAGACCCATTCGAGCCCACGGGCTTCATAACCGCTTTCTCAACATGGTCATTAGAGCCCAGCCCGCTTTACCTTCAATCTTCCCTCTCGTTTTCGGGCTACCTTGCGGAACTTGAACGTACTCTTGAATCATCTTCTACTAATTCTTCCTCGAGTGTTGTTGTTGATAATCTTAGGGCTTATATGCAGATTATCGATGTTTCGTCGATACTTGGATTGGATTGTGATATTTCTGATCATGCTTTTCAGTTGTTTAGGGATTGTTGTTCTGCCACTTGTTTGAGAAATCGTAGTGTTGAAGCTCTTGCTACTGCTGCTCTTGTTCAGGCTATTCGTGAAGCTCAAGAACCCAGAACCCTTCAGGAAATTTCAATTGCCGCCAATGTGGCACAAAAGGAAATCGGGAAATACATCAAGATACTGGGAGAAGCTTTGCAGCTAAGTCAACCTATTAACAGCAATTCTATATCAGTTCATATGCCAAGATTTTGCACTCTTCTTCAGCTCAATAAATCTGCTCAGGAACTGGCTACTCACATAGGAGACGTTGTGATCAACAAATGCTTCTGCACTCGCAGGAATCCAATTAGCATCTCAGCTGCTGCCATATATTTGGCTTGCCAACTAGAAGACAAACGCAAAACCCAGGCCGAAATTTGCAAAGTAACTGGTCTTACTGAAGTCACTCTCCGTAAAGTGTACAAAGAATTACTGGAGAATTGGGATGATTTACTTCCCTCTAATTACACCCCAGCTGTTCCTCCGGAGCGGGCATTTCCCACAACCTTAATTGCTTCTGGACGTTCTTCAACAACTAAGGTTGATGCTATAGAGGTTACTTCTTCTTTGGATTCAGAAAATTTGCCGGAATTTAAACCAAACAAGCCTAATGAGGCCGAAGGTAAAAGTAATGCTCGTGCAAGCCAATCCACGGCTATTCAACAGTCAACGTTTTGGCAATCCCAACTTCCCAGTGCGACCCAGAATCATCAAAATCCGAATGTTTTAGAGTCAATGGATATTGATGGGTTGCAGCGCAACCACCAACAACCTGAACCCATGGTAGAGGTCACAAATGGTGCTGCTATTGGTAGTTCTCTAAACTCAAACCAACTTTACAGTCCTTCTGCGTCAAGTTCAAGCTCTGTTATGAGGTCGCTTTCGGCTCCTCCTTCATCTGCTCCTCCAAATATTCGACACTTGCAATCGTCTAAGACAATGCCTGGTTTTCCAGAGTACTGA 1464 0.4515 MKCPYCSAAQGRCTTTTTGKLITECTSCGRVVEERQSHPHHIFHLRAQDNPLCLVTPDLPPPTLNQTNTEINEEEDPFEPTGFITAFSTWSLEPSPLYLQSSLSFSGYLAELERTLESSSTNSSSSVVVDNLRAYMQIIDVSSILGLDCDISDHAFQLFRDCCSATCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANVAQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGDVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTLIASGRSSTTKVDAIEVTSSLDSENLPEFKPNKPNEAEGKSNARASQSTAIQQSTFWQSQLPSATQNHQNPNVLESMDIDGLQRNHQQPEPMVEVTNGAAIGSSLNSNQLYSPSASSSSSVMRSLSAPPSSAPPNIRHLQSSKTMPGFPEY 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00866 487 MobiDBLite consensus disorder prediction 439 487 - -
Mepo5g00866 487 SUPERFAMILY Cyclin-like 133 223 IPR036915 -
Mepo5g00866 487 Gene3D - 132 223 - -
Mepo5g00866 487 FunFam Transcription initiation factor TFIIB 132 223 - -
Mepo5g00866 487 SMART cyclin_7 232 313 IPR013763 -
Mepo5g00866 487 SMART cyclin_7 136 217 IPR013763 -
Mepo5g00866 487 Pfam Transcription factor TFIIB repeat 134 215 IPR013150 GO:0017025
Mepo5g00866 487 Pfam Transcription factor TFIIB repeat 232 313 IPR013150 GO:0017025
Mepo5g00866 487 Gene3D - 232 328 - -
Mepo5g00866 487 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 1 330 IPR000812 GO:0006352|GO:0070897
Mepo5g00866 487 CDD CYCLIN_TFIIB_archaea_like_rpt2 229 315 - -
Mepo5g00866 487 PRINTS Transcription initiation factor IIB signature 18 38 IPR000812 GO:0006352|GO:0070897
Mepo5g00866 487 PRINTS Transcription initiation factor IIB signature 178 197 IPR000812 GO:0006352|GO:0070897
Mepo5g00866 487 PRINTS Transcription initiation factor IIB signature 204 219 IPR000812 GO:0006352|GO:0070897
Mepo5g00866 487 PRINTS Transcription initiation factor IIB signature 233 251 IPR000812 GO:0006352|GO:0070897
Mepo5g00866 487 PRINTS Transcription initiation factor IIB signature 267 283 IPR000812 GO:0006352|GO:0070897
Mepo5g00866 487 PRINTS Transcription initiation factor IIB signature 299 313 IPR000812 GO:0006352|GO:0070897
Mepo5g00866 487 MobiDBLite consensus disorder prediction 439 478 - -
Mepo5g00866 487 FunFam Transcription initiation factor IIB 232 329 - -
Mepo5g00866 487 MobiDBLite consensus disorder prediction 356 388 - -
Mepo5g00866 487 SUPERFAMILY Cyclin-like 230 328 IPR036915 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00866 K03124 - gmx:102662353 773.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00866 5 8431437 8435762 Mepo5g00866 5 8431437 8435762 ECH