Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00863 ATGTTGTCTAGTGGAAAAGAAACAAATGGGCACAGCCAATTATCATCCATGGAAAGCGCTTGTGGGGATGTAAACCATCTCAACAAGCATGCTTGTGCTTGTGTGTTAGCTGCCACTATTATCTCTGCCATATTTGGTTATGTTACAACAGTGATGGCTGGAGCACTCTTATTCATAAAGGAAGAACTTGAAATCAGTGACATGCAAGTGCAGCTTCTAGCAGGAATTTTAAATGCATGTGCATTACCAGCATGCATGATTGCAGGAAGATTATCCGATTACATAGGCCGACGCTACACAATCATGTTATCGTCGATATTCTTCTTCTTAGGTTCAATTTTAATGGGGTATGGTTCAACTTTTCCAATCTTAATGATTGGAAGATGCATTGCAGGATTTGGTGTTGGTTTTGCACTTATTATAGTATCTGTTTACAGTGCAGAAATTTCATCACCTTCTTATAGAGGATTTCTAACTTCTCTACCAGATCTTTCCATTAACATAGGTTTCTTACTTGGTTATGTCTCAAATTTTTTCCTTGGAAAATTATCTTTAAGACTTGGATGGAGAATAATGCTAGCTATTCCTTCAATACCTTCAATTGGTTTGGTAATATTAATGTTGCAATTGGTAGAGTCACCAAGATGGTTAGTAATGCAAGGAAGATTAGGTGATGCTAAGAAAGTTCTTTTATTAATCTCTAATTCAAAACAAGAAGCTGAACAAAGGTTGAAGGAAATAAAAAATGCTGTTGGAATTGATGAAAATTGCATCCAAAACATTGTTCATGTTTCAAAGAAAACTCGTAGTGGTGGAGGAGCTTTAAAAGAAATGTTTTATAAACCTTCACCACATGTATATAGGATACTTATTGCAGCTATTGGTGTTCATATATTTCAAAATATTTGTGGAGTTGAGGGTGTTTTTTTATTTAGTCCAAGAATTTTTGCAAGAATGGGAATAACTGATAAGGGTACACTTCTTTTAGCTACAGTTGGTATTGGGATAAGCCAAACTTTATTCACATTATTATCATGTTTTTTGTTGGATAAAATTGGGAGAAGGATTCTATTGTTGGTGAGTTCAGGTGGTGTGATTTTGAGTATGTTAGGATTATGTGTTTGTTCAGCTATAGTGGAGAATTCTAAATTAGGAGAAGAACCATTGTGGGCCATAATATTTACTATTATTGTTATATACATTATGGCAGGTTTTAATGCTATTGGAATTGGGGCTGTGACATGGGTTTATAGCACAGAGATATTTCCACTAAGGTTGAGAGCACAAGGACTTGGGATCTGTGTGATTATGAATAGAATTACTAATGTGGCAGTGGTTACTAGTTTTATTTCAATTTATAAAACTATAACATTGGGTGGGACTTTCTTTTTGTTTGTTGGTACAAATGTTTTGGGTTGGTGGTTTTACTATTCTTTCTTGCCTGAAACTAAAGGAAGATCATTAGAAGATATGGAGACTATCTTTGGGAAAGACTCCAACTCTGAGGTACAAATGAAGTGTGGAAGCAACAATTAA 1536 0.3503 MLSSGKETNGHSQLSSMESACGDVNHLNKHACACVLAATIISAIFGYVTTVMAGALLFIKEELEISDMQVQLLAGILNACALPACMIAGRLSDYIGRRYTIMLSSIFFFLGSILMGYGSTFPILMIGRCIAGFGVGFALIIVSVYSAEISSPSYRGFLTSLPDLSINIGFLLGYVSNFFLGKLSLRLGWRIMLAIPSIPSIGLVILMLQLVESPRWLVMQGRLGDAKKVLLLISNSKQEAEQRLKEIKNAVGIDENCIQNIVHVSKKTRSGGGALKEMFYKPSPHVYRILIAAIGVHIFQNICGVEGVFLFSPRIFARMGITDKGTLLLATVGIGISQTLFTLLSCFLLDKIGRRILLLVSSGGVILSMLGLCVCSAIVENSKLGEEPLWAIIFTIIVIYIMAGFNAIGIGAVTWVYSTEIFPLRLRAQGLGICVIMNRITNVAVVTSFISIYKTITLGGTFFLFVGTNVLGWWFYYSFLPETKGRSLEDMETIFGKDSNSEVQMKCGSNN 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00863 511 Pfam Sugar (and other) transporter 35 495 IPR005828 GO:0016020|GO:0022857|GO:0055085
Mepo5g00863 511 SUPERFAMILY MFS general substrate transporter 27 492 IPR036259 -
Mepo5g00863 511 PRINTS Sugar transporter signature 419 431 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mepo5g00863 511 PRINTS Sugar transporter signature 300 310 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mepo5g00863 511 PRINTS Sugar transporter signature 396 417 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mepo5g00863 511 PRINTS Sugar transporter signature 125 144 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mepo5g00863 511 PRINTS Sugar transporter signature 42 52 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mepo5g00863 511 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 19 504 - -
Mepo5g00863 511 FunFam probable polyol transporter 4 24 498 - -
Mepo5g00863 511 NCBIfam sugar porter family MFS transporter 31 490 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mepo5g00863 511 ProSitePatterns Sugar transport proteins signature 2. 130 155 IPR005829 GO:0016020|GO:0022857|GO:0055085
Mepo5g00863 511 Coils Coil 230 250 - -
Mepo5g00863 511 ProSitePatterns Sugar transport proteins signature 1. 88 105 IPR005829 GO:0016020|GO:0022857|GO:0055085
Mepo5g00863 511 ProSiteProfiles Major facilitator superfamily (MFS) profile. 34 484 IPR020846 GO:0022857
Mepo5g00863 511 Gene3D MFS general substrate transporter like domains 24 499 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00863 Mepo-Chr5 8416407 8419736 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00863 23 495 Organic Solute Cotransporters AT2G18480 52.954 2.69e-176 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00863 - - gmx:100786322 704.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g02022 1 20828451 20833283 Mepo5g00863 5 8416407 8419736 ECH
Mepo5g00863 5 8416407 8419736 Mepo5g00863 5 8416407 8419736 ECH