Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00846 ATGTCTCAACCTTCTTGGCTCTTTCATTTTTCAGCTTCACCTTCTCACCGTAACACACACCCACACTCACTGTTCCATTTTTCGGCGCCGTTCAAGCCTTACACTCTCCATTCGATCAGATTCTGTAAACCAGGCATCAACACTCCTGCGAGCTTCACCACCTTTTTTTCTTTCCCAGTCACCAATTTGAACCCTTCTTCCATCGGCGATGGACTTGCCTTTGTAATCTCGCCGGACGATGACTCTCCTGGTGATGCCGATGGTTATTCGGAGGTGGTCCTCACTAATGCAAACATAGCGAAGGACGAAAAAACCAAAGAAGAAACCAATTTCAATGGCTACATGCTTAAGAAAGCCAACATAGTGAACAAAGCATTGGATGAAGCAATTGTACTAGAAGAACCCGAGAAGATTTATGAAGCCATGCGATACTCTCTCCTCGCTGGAGGAAAGCGTGTTCGTCCTGTACTTTGTATTGCCGCCTGCGAACTTGTAGGCGGCAAAGAAGAAGCATCAATTCCATCAGCATGCGCCGTGGAAATGATCCACACCATGTCGTTAATCCATGATGATCTACCCTGCATGGATAACGACGATCTCAGACGTGGAAAGCCAACAAACCACAAAGTCTACGGTGAGGATGTGGCTGTCCTCGCTGGGGATGCATTACTTTCCTTCGCGTTTGAACACGTGGCTGTTTCAACCACAGGGGTCCCACCTGAAAAAATTGTTAGAGCAATTGCTGAGCTGGCAAAAGCAGTTGGAAAAGAAGGACTAGTTGCTGGACAAATTGTTGATTTAGAATCGGAAGGAAAATCAAATGTGGGATTAGAGACACTAGAGTTTATTCATCTTCGTAAAACCGCGGCTTTATTGGAAGCCGCGGTTGTTATGGGAGCAATAGTTGGTGGTGGCACTGAAGATGAAATTGAAAAATTAAGGAAATTTGCTAGGTATATTGGATTATTGTTTCAAGTTGTTGATGACATTCTTGATGTTACTAAATCATCTGAGGAATTAGGGAAAACTGCTGGGAAAGATTTGGCTGCTGATAAGGCTACTTATCCTAAGCTTTTGGGATTGGAAAAATCTAAGGAGTTTGCTGACAAATTGATTAAGGATGCACATGATTGTCTCATTGGTTTTGATGTTGAAAAGGCTGCTCCTTTAGTTGCTCTAACCAATTATATTGCTTGTAGGCAAAATTAG 1209 0.4342 MSQPSWLFHFSASPSHRNTHPHSLFHFSAPFKPYTLHSIRFCKPGINTPASFTTFFSFPVTNLNPSSIGDGLAFVISPDDDSPGDADGYSEVVLTNANIAKDEKTKEETNFNGYMLKKANIVNKALDEAIVLEEPEKIYEAMRYSLLAGGKRVRPVLCIAACELVGGKEEASIPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALLSFAFEHVAVSTTGVPPEKIVRAIAELAKAVGKEGLVAGQIVDLESEGKSNVGLETLEFIHLRKTAALLEAAVVMGAIVGGGTEDEIEKLRKFARYIGLLFQVVDDILDVTKSSEELGKTAGKDLAADKATYPKLLGLEKSKEFADKLIKDAHDCLIGFDVEKAAPLVALTNYIACRQN 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00846 402 ProSitePatterns Polyprenyl synthases signature 1. 187 203 IPR033749 -
Mepo5g00846 402 Gene3D Farnesyl Diphosphate Synthase 108 402 IPR008949 -
Mepo5g00846 402 SFLD Isoprenoid Synthase Type I 114 400 - -
Mepo5g00846 402 ProSitePatterns Polyprenyl synthases signature 2. 320 332 IPR033749 -
Mepo5g00846 402 Pfam Polyprenyl synthetase 136 373 IPR000092 GO:0008299
Mepo5g00846 402 SUPERFAMILY Terpenoid synthases 113 378 IPR008949 -
Mepo5g00846 402 CDD Trans_IPPS_HT 133 400 IPR000092 GO:0008299
Mepo5g00846 402 SUPERFAMILY Concanavalin A-like lectins/glucanases 38 89 IPR013320 -
Mepo5g00846 402 Gene3D - 34 107 - -
Mepo5g00846 402 FunFam Geranylgeranyl diphosphate synthase 108 402 - -
Mepo5g00846 402 SFLD Polyprenyl Transferase Like 114 400 - -
Mepo5g00846 402 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 95 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00846 Mepo-Chr5 8212055 8215899 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00846 39 89 Receptor kinase-like Gene Family AT5G03140 64.706 4.68e-14 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00846 K13789 - zju:107424859 471.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00846 5 8212055 8215899 Mepo5g00846 5 8212055 8215899 ECH
Mepo1g02015 1 20733149 20734757 Mepo5g00846 5 8212055 8215899 ECH
Mepo5g00846 5 8212055 8215899 Mepo1g02015 1 20733149 20734757 PCT