LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo5g00833	ATGAATTTGATTCCTATTTTTCGTGAATTCAACAAATCAACCTTCCATTTTCACATTCAATTTCGTTTCCATACACGTCGTCGTGACCCTTTTCCCACCAAAATCACTCACTACCTTAACCGTGGAAAACTCATCGATTCAATTCGTCTTTCACTACGTTCCAGTAACCCTAATTCCACACTCCCTACTCTCATAAACCACCGTTTATTCGACTCATTTGTCCTCACTCACGCTCTTCGTTCTGCTCCTTGTGCAGATTCTGCACTTTCCCTTATTCATACCATCGAGAATACAAAAAGTTCCAATTTTTCACATACCCAAAATACCCTCCATGCTCTTGCTACTGTGTTAGCAAAATCTGGTAAATTGGTTGAGCTCAAATCACTTATTGATGATATCGAATGTAAACGGTTTGGTAATGTTAAGATTAGTTTTATGAATTTAATGCAGTGGTATGCCGCAGCTAGGGATATTGATTCTGTTGTTAGGGTTTGGGATCAGTATAGAGTTGAAAGTAGAATAGTGTGTACTGAATCTTATAACATTGTTATGTCTCTTTATGTAGAGATGGGTAAGGATTCTGAGGCTGTTGGAGTTTTTTGTAAGATGGTTGATGACGGGTCGGTTCCGAATTGTAGAAGTTATAGTATAATAATTGAGCACCTTGTGAAATGTAGGAAGTTTTTGGAAGCTATTGAGGTTTTTAATTTGTTGCCTTTGATGAGGATTAAACGTACTTTGAAACAGTATTCGGTTCTAATTGATGGTTTGGTTGGTAGTAAAATGTTTGATGAAGTTGGAGTTTTAGTTAACGAGATGCAAGTTGATGGAATATTACCTAGTCGAACGGTGAGTTTGTTATTGCAGCAGGTGAAGGATGAAGGATTTCTTAAGGATGTGGATGAATTGTTTGAAGGGATTTGCTCGGATGAAAGAATCAAGAGTGTAAGTTTTTCTATTGATAGCAGTGATGAGGATGAGGATGAGAATGAGGACGAGGGTGGAAACGAGAATGAAGTTTCGCAATGTGATCATGTAGATGGGGTCCGCTTAAAACCTTGGCTGGATCCACGGTCTTTGGCTAGTGCCTTACAGAATTGGAGTCCTGATGAGGTATCAGCACTAGAGGGTGCAAAGTTTGTGTGGACAACTAGGTTGGTATGCAAGATACTTAGAAGTTTCAGGTCACCAGATACTGCGTGGAATTTCTTCTGCTGGGTTGCTGATCAACCTGGATTTACTCATAATATATACACAGTGCAAAGAATCATGACCCTTCTAGCGCGACATGGACGTACTGAATTAGTTGATAGACTCATCTCGAAGATCAGAATAGAGGGAATGAGACTACCATTCAGTACCATAAGGTTAATCATTGACTTTTATGGAATTTCAAAAAATGCTGATGCTGCTCTGAAGGTTTTCAATGATGATCAAATACTTTGTGGGTCTATATCGAAAGTTAACTTGATGCTTCTGTATTCCTCTCTTTTAAGAACATTAACCAAGTGTGGAAGAAATTCCGATACCCTGGACATGCTTGATGAGATGATTTTAAATGGCATTTGTCCAGATATCCAAACATTTTCAGGTCTAATGCAGTATTTTTCACAACTTGGAGATATTAAAACCGTGCAGAAACTCTTTTCAATGGTCAGACAGAGCGGTTTCGAGCCAGACGCGTATCTGTATAAGGTCCTGATAGAAGGTTATTGTAAGTCAACAAGAGCTGCACTGGCTTGGAGACTATTTGAAGATATGAAGAATTTTGGTTCCATGCCTGATTCTGCCACCAAAGAGTTGCTAGTGAAGAGCCTCTGGAAAGAAGGGAGACGGAGAGAGGCCGCTGCTGTTGAAGAGAGCTGCGAGGAAGTAAATGTGGTCCTTCCACTTGCATTACCTGGTCATGTATGGACTGTCAGCTCTGCAGATCTCACAAGAGTTTATAACATTTATTCAAATAGTTTTGTTTCAAAGTGTGCCTAG	1986	0.3958	MNLIPIFREFNKSTFHFHIQFRFHTRRRDPFPTKITHYLNRGKLIDSIRLSLRSSNPNSTLPTLINHRLFDSFVLTHALRSAPCADSALSLIHTIENTKSSNFSHTQNTLHALATVLAKSGKLVELKSLIDDIECKRFGNVKISFMNLMQWYAAARDIDSVVRVWDQYRVESRIVCTESYNIVMSLYVEMGKDSEAVGVFCKMVDDGSVPNCRSYSIIIEHLVKCRKFLEAIEVFNLLPLMRIKRTLKQYSVLIDGLVGSKMFDEVGVLVNEMQVDGILPSRTVSLLLQQVKDEGFLKDVDELFEGICSDERIKSVSFSIDSSDEDEDENEDEGGNENEVSQCDHVDGVRLKPWLDPRSLASALQNWSPDEVSALEGAKFVWTTRLVCKILRSFRSPDTAWNFFCWVADQPGFTHNIYTVQRIMTLLARHGRTELVDRLISKIRIEGMRLPFSTIRLIIDFYGISKNADAALKVFNDDQILCGSISKVNLMLLYSSLLRTLTKCGRNSDTLDMLDEMILNGICPDIQTFSGLMQYFSQLGDIKTVQKLFSMVRQSGFEPDAYLYKVLIEGYCKSTRAALAWRLFEDMKNFGSMPDSATKELLVKSLWKEGRRREAAAVEESCEEVNVVLPLALPGHVWTVSSADLTRVYNIYSNSFVSKCA	661

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo5g00833	661	MobiDBLite	consensus disorder prediction	320	342	-	-
	Mepo5g00833	661	Pfam	PPR repeat family	559	606	IPR002885	-
	Mepo5g00833	661	Pfam	PPR repeat family	177	223	IPR002885	-
	Mepo5g00833	661	MobiDBLite	consensus disorder prediction	322	337	-	-
	Mepo5g00833	661	Gene3D	Tetratricopeptide repeat domain	141	354	IPR011990	GO:0005515
	Mepo5g00833	661	Gene3D	Tetratricopeptide repeat domain	488	632	IPR011990	GO:0005515
	Mepo5g00833	661	ProSiteProfiles	Pentatricopeptide (PPR) repeat profile.	176	210	IPR002885	-
	Mepo5g00833	661	ProSiteProfiles	Pentatricopeptide (PPR) repeat profile.	525	559	IPR002885	-
	Mepo5g00833	661	PANTHER	OS01G0167750 PROTEIN	18	659	IPR044175	-
	Mepo5g00833	661	ProSiteProfiles	Pentatricopeptide (PPR) repeat profile.	490	524	IPR002885	-
	Mepo5g00833	661	ProSiteProfiles	Pentatricopeptide (PPR) repeat profile.	246	280	IPR002885	-
	Mepo5g00833	661	Gene3D	Tetratricopeptide repeat domain	363	487	IPR011990	GO:0005515
	Mepo5g00833	661	ProSiteProfiles	Pentatricopeptide (PPR) repeat profile.	560	594	IPR002885	-
	Mepo5g00833	661	Pfam	PPR repeat	494	522	IPR002885	-
	Mepo5g00833	661	Pfam	PPR repeat	250	278	IPR002885	-
	Mepo5g00833	661	NCBIfam	pentatricopeptide repeat	563	595	IPR002885	-
	Mepo5g00833	661	NCBIfam	pentatricopeptide repeat	179	212	IPR002885	-
	Mepo5g00833	661	NCBIfam	pentatricopeptide repeat	250	281	IPR002885	-
	Mepo5g00833	661	NCBIfam	pentatricopeptide repeat	494	526	IPR002885	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo5g00833	493	619	Glycosyltransferase	AT1G05670	29.134	4.80e-12	67.4

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo5g00833	-		-	cam:101514749	1096.26

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mepo5g00833	5	8053910	8056220	Mepo5g00833	5	8053910	8056220	ECH