Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00809 ATGACAGGGTCATCAAGAAAAGGACATACATTCTTGGATGAAGGAAGCGTACATGGTAGAAGATTTGGCAAATTGAAAAAAGACGAATTCGACGGCTACAACTCCGACAATCATCCTCGAAAAAACAGCCCTGTTAAAACAACTGATGCACCCCATTTAGATCCTCAAATGGCATCAGATAATTCACCATATGATGCATCTCTTTCACCATTATCAAAATCACCATGGCATGTTAACGAAGAAGCTTCGTCTAGCGAAGAAGCTCTTGTTGGCTCATTAGTTCGCGAAGAAGGTCACATTTATTCTCTTGCAGCCACGAAAGATTTATTATATACCGGTTCTGATAGTAAAAACATTCGTGTTTGGAAGAATCAAAAGGAATTCGCGGGGTTTAAATCAAATAGTGGTTTAGTTAAAGCAATTGTTATAGCCGGTGAGAAGATTCTCACCGGCCATCAAGATGGAAGAATTCGTGTTTGGAGAGTTTCAAACAAGAATGAACAAACTTATAGAAGAGCCGCGACGTTGCCTACGCTAAGAAACTATATCAAATGTTCAATGAAACCGAGTAATTATGTCGAGGTTAGAAGACACCGTAATGTTTTGTGGATTAAACATTATGATGCAATTTCGTGTTTAAGTTTAACGGAAGATCTTACATTAATTTACTCAGCTTCGTGGGATAAGACTTTTAAAGTTTGGCGTGCTTCAAATTACAAATGTTTAGAATCAGTAACAGCTCATGATGACGCTGTTAACGCGCTAGTTGTTGGATTTGATGGTTTGGTTTTTACCGGTTCAGCTGATGGAACAGTTAAGATTTGGCGGCGTGAGATGCAAGGAAAAGGAACAAAACATTTCTTTTCACAGACATTGTTGAAACAAGAATGTGCAGTAACAGCATTAGCATTAAATTCTGATGGGACATTTTTATACGCGGGTTCTTCAGATGGGTTGGTTAATTATTGGGTACGAGAAACGAATTTGGAACACTGTGGAATATTAAGGGGTCATAAATTGGCGGTTTTGTGTTTGGCGGCGGCTGGAAGTTTGGTGTTTAGTGGTTCTGCTGACATGGCAATTTGTGTGTGGAAACGATCTATTACTAATGAACATGCTTGTATATCGGTGTTGAGTGGACATACTGGACCGGTGAAGTGTCTCGCTGCTGAGAAGGATCTCGATGTGATGTTACATGAGCGAAAGTGGATTTTGTATAGTGGGAGTTTGGATAAGTCCGTTAAGGTTTGGAAGGTTAAGGAGAATGCGGCCCCCGGAGGACAACAGACTCACCAACAACTACCACGGCTTAGTGTTAGTAGTGGTGAGTTTCCTAGAGTGTCGTCGTTGCGAAAAATGGGATCACGAAGATACTAG 1377 0.4052 MTGSSRKGHTFLDEGSVHGRRFGKLKKDEFDGYNSDNHPRKNSPVKTTDAPHLDPQMASDNSPYDASLSPLSKSPWHVNEEASSSEEALVGSLVREEGHIYSLAATKDLLYTGSDSKNIRVWKNQKEFAGFKSNSGLVKAIVIAGEKILTGHQDGRIRVWRVSNKNEQTYRRAATLPTLRNYIKCSMKPSNYVEVRRHRNVLWIKHYDAISCLSLTEDLTLIYSASWDKTFKVWRASNYKCLESVTAHDDAVNALVVGFDGLVFTGSADGTVKIWRREMQGKGTKHFFSQTLLKQECAVTALALNSDGTFLYAGSSDGLVNYWVRETNLEHCGILRGHKLAVLCLAAAGSLVFSGSADMAICVWKRSITNEHACISVLSGHTGPVKCLAAEKDLDVMLHERKWILYSGSLDKSVKVWKVKENAAPGGQQTHQQLPRLSVSSGEFPRVSSLRKMGSRRY 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00809 458 PRINTS G protein beta WD-40 repeat signature 405 419 IPR020472 -
Mepo5g00809 458 PRINTS G protein beta WD-40 repeat signature 263 277 IPR020472 -
Mepo5g00809 458 PRINTS G protein beta WD-40 repeat signature 148 162 IPR020472 -
Mepo5g00809 458 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 245 275 - -
Mepo5g00809 458 Pfam WD domain, G-beta repeat 297 323 IPR001680 GO:0005515
Mepo5g00809 458 Pfam WD domain, G-beta repeat 374 418 IPR001680 GO:0005515
Mepo5g00809 458 Pfam WD domain, G-beta repeat 240 275 IPR001680 GO:0005515
Mepo5g00809 458 Pfam WD domain, G-beta repeat 333 365 IPR001680 GO:0005515
Mepo5g00809 458 Pfam WD domain, G-beta repeat 97 123 IPR001680 GO:0005515
Mepo5g00809 458 Pfam WD domain, G-beta repeat 206 234 IPR001680 GO:0005515
Mepo5g00809 458 FunFam BnaA09g28200D protein 193 280 - -
Mepo5g00809 458 SUPERFAMILY WD40 repeat-like 97 422 IPR036322 GO:0005515
Mepo5g00809 458 SMART WD40_4 86 123 IPR001680 GO:0005515
Mepo5g00809 458 SMART WD40_4 285 324 IPR001680 GO:0005515
Mepo5g00809 458 SMART WD40_4 371 418 IPR001680 GO:0005515
Mepo5g00809 458 SMART WD40_4 328 365 IPR001680 GO:0005515
Mepo5g00809 458 SMART WD40_4 197 235 IPR001680 GO:0005515
Mepo5g00809 458 SMART WD40_4 124 161 IPR001680 GO:0005515
Mepo5g00809 458 SMART WD40_4 238 276 IPR001680 GO:0005515
Mepo5g00809 458 MobiDBLite consensus disorder prediction 27 79 - -
Mepo5g00809 458 MobiDBLite consensus disorder prediction 27 47 - -
Mepo5g00809 458 ProSiteProfiles Trp-Asp (WD) repeats profile. 203 244 IPR001680 GO:0005515
Mepo5g00809 458 ProSiteProfiles Trp-Asp (WD) repeats profile. 292 323 IPR001680 GO:0005515
Mepo5g00809 458 Gene3D - 62 181 IPR015943 GO:0005515
Mepo5g00809 458 PANTHER F-BOX AND WD40 DOMAIN PROTEIN 51 423 IPR045182 -
Mepo5g00809 458 ProSiteProfiles Trp-Asp (WD) repeats profile. 245 275 IPR001680 GO:0005515
Mepo5g00809 458 Gene3D - 193 450 IPR015943 GO:0005515
Mepo5g00809 458 MobiDBLite consensus disorder prediction 60 79 - -
Mepo5g00809 458 CDD WD40 97 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00809 Mepo-Chr5 7785082 7786458 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00809 203 430 Miscellaneous Gene Families AT5G08390 24.051 2.35e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00809 - - gmx:100778593 783.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00809 5 7785082 7786458 Mepo5g00809 5 7785082 7786458 ECH