Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00540 ATGGATTTCACGGGGAAGGACCTTTTCGGCGAAGATTCCGACAACGATAAAGATGGGACCCACTCTTCTTCTTCGTCTTCTTCTTCCTCTGCCGCTTCATCTTCCTCTTCTTCTTCATCTTCCGCAGCTTCTTCCTCCAAAGGTTCCGCAGATTCCTCTTCCGATAGCGGAAGCGGAGCTAGTAGTGGCGGTGGCGGTGATGATGAAGAAAACGGTGATGTTGTTGATAGTAGTAATAGGGTTGATTCTCATCATGATGATGATGATCATGATGATAGAGATCTGTTTGGTGATGATAATGAAGATTATTGTAAAACCCTTGCTAAAAGTCCTTACCCTATTCCTGTATTGCCTCCCATCCGCAATAATACAAACAACCCGGGAAGAGGGGGTGGTGGACGTGGTCGTTGGCAACAAGGGCAGCATAATGATAGAGGAGCTGGCATTCTTCCGCGTCCTGGACCTTATCCTCAGAGGCAGAATTTTGGGTATGGTAATAGGTTTCAGAATGGCCACCGCGATGAACGTTTTGTCTCTGAAATGAAGCTCTCGAAAAGTGAAGAAACTCTGTCAAGAAAGGTTATTGCTTTTCAAGAGCCCTGTGAACTTGCTTGCTATAGTCGCGCAGAAGGCGGGGAAGTGTATTTTGATGATCGTAGCTTGAGACTTTTTAAACGCCATATCACTGAAGATATTGGAGCTGATTTGAACGAAGGTTATGATACATACATTCCCAAAAAAGACTTAGGCTCAGAAGGTTATGGCGATCTCCTTGCTTGCATAAGAGATAAAAAAATCCATCTTCAAAACATCCATTTTGTGACGTACCGCAACAATCTGAACAAGATACTTGCTACGGCTTATATTCGCCATGAGCCTTGGGAAATGGGAGTGCACAAAAGGAATGGTGTTGTCTATCTCGATGTGCACAAGTTACCAGAAAGGCCACAAAGTGATTTAGATCGCAGGAGATGTTATCTGGGTTACTCTTTTGAGAGCCTTGCTACTGAAGATCCTAGAAGAGCAGATGGAGAGCCGATACATGATGTTGATGCCAATGTTGAATTTTGTTCAGTGATTAAGACAAAATTGGGGGCTCACCGTATCTTGATGGGTGCTGAGATGGATTGCTGTGATACGACTACTGAGGGAAAGAGATTTTACGTGGAGTTAAAGACAAGTTACGAGTTGAATTATCATAACGAGGAAAAATTTGAGAGAGAGAAACTGCTAAAGTTTTGGATTCAGTCATTCCTGGCAGGCGTTCCATATATTTGTATAGGATTTAGGGATGATGCAGGCCGTCTTGTTCGGACTGAAATGCTTAGAACCAAAGATATTACGCAGAGAATAAAAATGAAGGGCTACTGGCAGGGTGGAGTCTGCCTGGCATTTGCGGACGAGGTATTATGCTGGCTTTATGGAACAGTCAAAGAAAATGAAGATTACATATTGCAGTTCGCGCCACCTTTCAACCGTTTGGAACTTCTGCAAGCTCACTCTTGTCCAGATGTAATAACAAGTCACCTGGAGCTGTTGTGA 1542 0.4371 MDFTGKDLFGEDSDNDKDGTHSSSSSSSSSAASSSSSSSSSAASSSKGSADSSSDSGSGASSGGGGDDEENGDVVDSSNRVDSHHDDDDHDDRDLFGDDNEDYCKTLAKSPYPIPVLPPIRNNTNNPGRGGGGRGRWQQGQHNDRGAGILPRPGPYPQRQNFGYGNRFQNGHRDERFVSEMKLSKSEETLSRKVIAFQEPCELACYSRAEGGEVYFDDRSLRLFKRHITEDIGADLNEGYDTYIPKKDLGSEGYGDLLACIRDKKIHLQNIHFVTYRNNLNKILATAYIRHEPWEMGVHKRNGVVYLDVHKLPERPQSDLDRRRCYLGYSFESLATEDPRRADGEPIHDVDANVEFCSVIKTKLGAHRILMGAEMDCCDTTTEGKRFYVELKTSYELNYHNEEKFEREKLLKFWIQSFLAGVPYICIGFRDDAGRLVRTEMLRTKDITQRIKMKGYWQGGVCLAFADEVLCWLYGTVKENEDYILQFAPPFNRLELLQAHSCPDVITSHLELL 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00540 513 Pfam RAI1 like PD-(D/E)XK nuclease 375 437 IPR013961 -
Mepo5g00540 513 MobiDBLite consensus disorder prediction 73 98 - -
Mepo5g00540 513 PANTHER DOM-3 RELATED 21 502 IPR039039 -
Mepo5g00540 513 MobiDBLite consensus disorder prediction 1 98 - -
Mepo5g00540 513 MobiDBLite consensus disorder prediction 20 61 - -
Mepo5g00540 513 MobiDBLite consensus disorder prediction 114 153 - -
Mepo5g00540 513 MobiDBLite consensus disorder prediction 1 19 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00540 K14845 - gmx:100798780 788.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00540 5 4711987 4717542 Mepo5g00540 5 4711987 4717542 ECH