Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00527 ATGACTGCAACTCCCTTAATCACTATTAGTCCCGACGAGCTCAGGTTTCATTTTGAGCTGGAAAAGCAAACATTTTGTGATCTTAAAGTCCTCAATAACACAGAGAACTATGTTGCTTTCAAGGTCAAAACCACTTCACCAAAGAAGTACTTTGTACGACCAAACACTGGGGTTATACATCCTTGGGACTCATGTATCATCAGAGTCACCCTTCAAGCCCAACGCGAATATCCTCCAGATATGCAATGTAAAGACAAGTTTCTCTTACAGAGTACGATAGTGGCTCCAAATACTGATGTTGATGATCTTCCGGCAAATACTTTTAATAAGGATAGTGGTAATTCAATAGAAGATTTGAAACTAAGAGTCGCATATATCACTCCCTCTTCACCCGAAGGAAGCTCTGAAGATGATGCCGCAAAGAACTCTGGACAAAAACTCGATACCTCTTCTAATCAGGCTGTACAGCTCTTGAAGGAAGAAATAGAGGCTGCTGCCAGACAAACGCGACAGCTTCAACAGGAACTGGACATGCTGAGAAGGCGTAGAAACCAGAGAGGCGATCCTGGCTTTTCCCTCACCTTCGCCTTTTTTGTTGGTCTCCTTGGATTTTTGCTTGGCTTTCTATTGAAATTTTTATTCTCTTCACCATCTACAGAATAA 663 0.4193 MTATPLITISPDELRFHFELEKQTFCDLKVLNNTENYVAFKVKTTSPKKYFVRPNTGVIHPWDSCIIRVTLQAQREYPPDMQCKDKFLLQSTIVAPNTDVDDLPANTFNKDSGNSIEDLKLRVAYITPSSPEGSSEDDAAKNSGQKLDTSSNQAVQLLKEEIEAAARQTRQLQQELDMLRRRRNQRGDPGFSLTFAFFVGLLGFLLGFLLKFLFSSPSTE 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00527 220 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 5 209 IPR016763 GO:0005789
Mepo5g00527 220 PIRSF VAMP_assoc_prot 134 212 IPR016763 GO:0005789
Mepo5g00527 220 PIRSF VAMP_assoc_prot 1 157 IPR016763 GO:0005789
Mepo5g00527 220 MobiDBLite consensus disorder prediction 128 150 - -
Mepo5g00527 220 SUPERFAMILY PapD-like 4 136 IPR008962 -
Mepo5g00527 220 Gene3D Immunoglobulins 2 130 IPR013783 -
Mepo5g00527 220 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Mepo5g00527 220 Pfam MSP (Major sperm protein) domain 7 109 IPR000535 -
Mepo5g00527 220 Coils Coil 155 182 - -
Mepo5g00527 220 FunFam Vesicle-associated protein 1-1 1 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00527 Mepo-Chr5 4533255 4537637 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00527 - - gmx:100794270 338.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01618 1 15921472 15924835 Mepo5g00527 5 4533255 4537637 PCT