Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00526 ATGGCTTCTCAAGTTTTAGTTCAGGCTCTGTTTTCCCCAATTCAATGTCCTCCAACGAAGCTATGTTTCACTTCTTCTTGCACCGCTTCCACATTCGGTTCTCGTAACTTGCCGTTGATTTCTACCTCAATTTCATGGCGCTGTAGTCCTCTCATTGCTAAACCTAGTTTTATTGTGAGAGCTGATTCCAATTCCGATGCTGTTTCCGCTTCGGATAATGTTGATGAAGTTCCGGAAGCTGAAGGAGAACAGGTTTTGGATTCTGCATCTGAGGTGGAGGAAGCCAAGCCTCCCAGACAAACTCGGGTTAAGCTTGGTGATGTTATGGGGATATTGCATAAGAGGGCAATTGCAGCTTCAGATGAAGTGAGGACCACTCCTGACCTAAGGACTGGAGATATTGTGGAAATCAGATTGGAAGTTCCGGAGAACAAACGTAGGTTATCCATTTATAAAGGTATTGTCATCTCAAGACAAAATGCTGGTATTCACACGACTATTCGCGTCCGAAGAATTATTGCCGGCACAGGGGTTGAGATAGTCTTCCCAATTTACTCACCAAACATCAAAGAAATCAAAGTGGTAAAGCACCGAAAGGTCAGGCAGGCAAGACTGTACTATCTAAAAGACAAGCTTCCCAGATTCTCCACTTTCAAATGA 660 0.4394 MASQVLVQALFSPIQCPPTKLCFTSSCTASTFGSRNLPLISTSISWRCSPLIAKPSFIVRADSNSDAVSASDNVDEVPEAEGEQVLDSASEVEEAKPPRQTRVKLGDVMGILHKRAIAASDEVRTTPDLRTGDIVEIRLEVPENKRRLSIYKGIVISRQNAGIHTTIRVRRIIAGTGVEIVFPIYSPNIKEIKVVKHRKVRQARLYYLKDKLPRFSTFK 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00526 219 FunFam 50S ribosomal protein L19, chloroplastic 106 218 - -
Mepo5g00526 219 NCBIfam 50S ribosomal protein L19 124 211 IPR001857 GO:0003735|GO:0005840|GO:0006412
Mepo5g00526 219 Pfam Ribosomal protein L19 122 212 IPR001857 GO:0003735|GO:0005840|GO:0006412
Mepo5g00526 219 PRINTS Ribosomal protein L19 signature 172 195 IPR001857 GO:0003735|GO:0005840|GO:0006412
Mepo5g00526 219 PRINTS Ribosomal protein L19 signature 113 142 IPR001857 GO:0003735|GO:0005840|GO:0006412
Mepo5g00526 219 PANTHER RIBOSOMAL PROTEIN L19 33 219 IPR001857 GO:0003735|GO:0005840|GO:0006412
Mepo5g00526 219 SUPERFAMILY Translation proteins SH3-like domain 119 219 IPR008991 -
Mepo5g00526 219 Gene3D - 107 218 IPR038657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00526 Mepo-Chr5 4528085 4530679 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00526 K02884 - gmx:100305649 275.789