Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00472 ATGATGTCCACTGGCGACCTTCTCAACATCGAACCCGTCGAACTCAAGTTCTTATTTGAGCTCAAGAAACAGATCTCGTGTTCTCTTCAATTATCAAATAAGACAGATAGCTATGTTGCTTTCAAGGTAAAAACGACCAATCCCAGGAAGTATTGTGTTCGTCCAAACACTGGAGTTGTTTTGCCTAAATCTACATGTGAAGTTATAGTTACCATGCAAGCGCAAAAGGAAATTCCCCCTGATATGCAATGCAAGGATAAGTTTCTTCTTCAAAGTGTAAGAGTAAATGATGGTGCTGACCCGAAGGATATTACTCCCGAAATGTTCAACAAGGAAGCAGGGCACGTGGTTGAGGAGTGCAAATTGAGAGTGGTATATGTTGCTCCACCTCAACCTCCATCTCCAGTCCCAGAAAGTTCTGAGGAAGGATCATCACCCAGAGGTTCTGTTACTGAAAATGGAAATGCCAATGGTTCTGACTCCACAACGGTGGTGAGAGGATTTACCGAACGAAACGGGACTCCAGGAAAATCTGCAGAGGCAAAAGCTCTTATGTCAAGGCTGACCGAAGAAAAGAATAATGCAATTCAACTAAATAGCAAGCTGCGTCAGGAACTGGACATGCTGAGACGTCAAAGCAACAAAAGTCGTGGCAATGTCTCCATGATCTTTGTCATATTAATTGGTTTACTTGGCTTAATTATGGGGTATCTCCTGAAGAGGACCTAA 729 0.4294 MMSTGDLLNIEPVELKFLFELKKQISCSLQLSNKTDSYVAFKVKTTNPRKYCVRPNTGVVLPKSTCEVIVTMQAQKEIPPDMQCKDKFLLQSVRVNDGADPKDITPEMFNKEAGHVVEECKLRVVYVAPPQPPSPVPESSEEGSSPRGSVTENGNANGSDSTTVVRGFTERNGTPGKSAEAKALMSRLTEEKNNAIQLNSKLRQELDMLRRQSNKSRGNVSMIFVILIGLLGLIMGYLLKRT 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00472 242 Pfam MSP (Major sperm protein) domain 8 112 IPR000535 -
Mepo5g00472 242 PIRSF VAMP_assoc_prot 1 241 IPR016763 GO:0005789
Mepo5g00472 242 Coils Coil 181 219 - -
Mepo5g00472 242 ProSiteProfiles Major sperm protein (MSP) domain profile. 7 127 IPR000535 -
Mepo5g00472 242 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 5 238 IPR016763 GO:0005789
Mepo5g00472 242 FunFam Vesicle-associated protein 1-1 2 130 - -
Mepo5g00472 242 Gene3D Immunoglobulins 2 131 IPR013783 -
Mepo5g00472 242 MobiDBLite consensus disorder prediction 140 169 - -
Mepo5g00472 242 MobiDBLite consensus disorder prediction 131 179 - -
Mepo5g00472 242 SUPERFAMILY PapD-like 2 142 IPR008962 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00472 Mepo-Chr5 4102931 4106557 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00472 - - gmx:100527687 350.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00472 5 4102931 4106557 Mepo5g00472 5 4102931 4106557 ECH
Mepo5g00472 5 4102931 4106557 Mepo1g01618 1 15921472 15924835 PCT