Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00435 ATGGCTACCACACCGTCGCCGCCCCCAATGTCGCCGCCGGTGAACCCTGGTCGCGTTCGGACCTTGAAAGAAGGTTCTGGAAAAACGGGTCCCGTCGTGTACTGGATGTTCAGAGATCAACGGTTGAAGGACAACTGGGCTCTCATCCACGCCGTTCATCAAGCCAACAAAGCAAAAGTTCCTGTTGCCGTTGTTTTCAATCTGTTTGATCATTTTCTCGGTGCAAAGGCGCGTCATTTAGGGTTTATGCTTAAGGGTTTGCGTCAATTGTGTCTCCAACTTCAGCATTCTCTTCAAATACCATTTTTCTTAGTTCGGGGTGAGGCGGAGGAAACTGTATCGAATTTTGTTAGAGAATGTGGAGCTTCACTTTTGGTGACAGATATGTCACCTTTAAGAGAAGTGAAGAAATGCAAAGCTGAGATTTGTGAGAGAGTTAGTGATTTGGTTACTGTTCATGAAGTTGATGCTCACAATGTTGTGCCTCTTTGGGCTGCTTCTGAGAAGTTGGAGTATAGTGCTAGAACAATAAGGGGAAAGATAAACAAAAAGCTTTCTGATTATCTTGTTGATTTTCCTGATGTCGAACCACCAACTACAAAATGGGTCATCACTAAGGATCATGTCATAGACTGGGATGATATCATTGCGCAAGTGTTAAGGAGTGGAGCTGAGGTTCCTGAAGTGGATTGGTGTGAGCCTGGAGAAATTGCTGCAATGGAGGTATTGATGGGAAGTAAAAATGGATTCTTGACTACAAGGTTGAGAAATTATTCCACAGACCGCAATAACCCTTGTAAACCAACTGCACTTTCTGGTTTATCTCCCTATTTGCATTTTGGACAGATATCTGCTCAAAGATGTGCTTTAGAAGCTCGTAAGCTACGAGCTTCTTATCCTCAGGCTGTTGATACTTTCTTAGAGGAGTTGATTGTGCGGAGAGAACTTGCTGATAACTTTTGCTACTATCAGCCTCATTATGATTCATTACAAGGAGCATGGGAGTGGGCTCGTAAAACCTTACTTGACCACGCCTCTGATAAGCGACCACATGTTTATACAAGGGAGCAATTGGAGAAGGCAAAAACTGCTGATCCTCTTTGGAATGCTTCTCAATTGGAGATGGTTCACTATGGGAAAATGCACGGTTTTATGCGAATGTATTGGGCGAAGAAGATACTTGAATGGACAAAAGGACCTGAAGAAGCACTTGAGATATGTATATATTTAAATGATAAGTATGAAATGGATGGGAGGGATCCAAGTGGTTATAATGGCTGCATGTGGTCTATATGTGGGGTACATGATCAGGGGTGGCGAGAGCGTCCCATTTTTGGGAAAATTCGATACATGAATTACGAAGGTTGCAAAAGAAAATTTGATGTTGACAAATACATTGCATACGTTAATAAAATAGTTGGTGAGCTCAGGAAGAGAAAAGCGGAAAATTTGCTGTCTGAGAAGGAGAAAGTACTCCGTTGTAGTAATCCAGAGGATTGA 1500 0.4267 MATTPSPPPMSPPVNPGRVRTLKEGSGKTGPVVYWMFRDQRLKDNWALIHAVHQANKAKVPVAVVFNLFDHFLGAKARHLGFMLKGLRQLCLQLQHSLQIPFFLVRGEAEETVSNFVRECGASLLVTDMSPLREVKKCKAEICERVSDLVTVHEVDAHNVVPLWAASEKLEYSARTIRGKINKKLSDYLVDFPDVEPPTTKWVITKDHVIDWDDIIAQVLRSGAEVPEVDWCEPGEIAAMEVLMGSKNGFLTTRLRNYSTDRNNPCKPTALSGLSPYLHFGQISAQRCALEARKLRASYPQAVDTFLEELIVRRELADNFCYYQPHYDSLQGAWEWARKTLLDHASDKRPHVYTREQLEKAKTADPLWNASQLEMVHYGKMHGFMRMYWAKKILEWTKGPEEALEICIYLNDKYEMDGRDPSGYNGCMWSICGVHDQGWRERPIFGKIRYMNYEGCKRKFDVDKYIAYVNKIVGELRKRKAENLLSEKEKVLRCSNPED 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00435 499 MobiDBLite consensus disorder prediction 1 15 - -
Mepo5g00435 499 NCBIfam deoxyribodipyrimidine photo-lyase 14 468 IPR008148 GO:0003904|GO:0006281
Mepo5g00435 499 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 31 203 IPR036155 -
Mepo5g00435 499 FunFam Deoxyribodipyrimidine photolyase 13 157 - -
Mepo5g00435 499 FunFam Deoxyribodipyrimidine photolyase 158 329 - -
Mepo5g00435 499 Gene3D HUPs 12 157 IPR014729 -
Mepo5g00435 499 Gene3D - 158 329 - -
Mepo5g00435 499 Pfam DNA photolyase 32 193 IPR006050 -
Mepo5g00435 499 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 223 478 IPR036134 -
Mepo5g00435 499 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 330 480 - -
Mepo5g00435 499 PANTHER DEOXYRIBODIPYRIMIDINE PHOTOLYASE 7 490 - -
Mepo5g00435 499 ProSitePatterns DNA photolyases class 2 signature 1. 306 320 IPR032673 -
Mepo5g00435 499 MobiDBLite consensus disorder prediction 1 25 - -
Mepo5g00435 499 ProSitePatterns DNA photolyases class 2 signature 2. 433 452 IPR032673 -
Mepo5g00435 499 FunFam Deoxyribodipyrimidine photolyase 330 477 - -
Mepo5g00435 499 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 30 163 IPR006050 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00435 K01669 - gmx:100170749 844.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00435 5 3839039 3842540 Mepo5g00435 5 3839039 3842540 ECH