Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00419 ATGAAAATTATAGTGCCTTTGCAAGGAGTTGTTCAAGGAACAGGGGGACTTTTTTGGGGTTCAGTTATTCCTTGCGCTCTTTTCTACTTTCTTCAGCTTTATTTTAAGACACGTAACCGCCAATCTCCTCCTTCCAACAACCTTCCGCCTCCGGAGCTCCCTGCCTTGTCACGCTCTCTCTCACCGCGGATCAGAGGTTCAACCACCGCCGTTCATATTTCTGGTCGAGTCAATTCCATAATTGCAACAGACTCTCCTTATTACGTAGGTTTAAACAAAGTCGCAGATAATCCATATCATCGGATTCATAATCCTGATGGTGTTATTCAGCTTGCTTTGGCTCAAAACACCCTATGTGTGGATTTGATTGAAGAATGGATTTGTCACAATGGAAGCGCTGCTATATTAGGGACAACATCAAACTGTGGTTGCCTCAGTATCACTGACCTTGCTACTTACCATGGATTCATGGACTTCAAAGTGGTTGTGGCTGGTTTCATGTCTCAAGTTTTGGAAAAACCAGTTTTCTTCAACCCTTCACATATGGTGCTAACTGCAGGTGCTATCCCTGCCATTGAAATTCTAAGCTTCTGCCTAGCAGATAATGGAAATGCATTCCTTGTTCCTACGCCTCATAGTCCTGGCTTTGATGAGGCCATAAAATGGCGATCTGGGGTGGATGTAGTATATGTTTCATGTCGCAGCGCTGATGACTTCAACATAAGCATAACTGCACTTGACCAAGCCTTCAACCAAGCGAAGAAACGTAGTCAAAAAATTCGTGGAGTTATAATATCAAACCCTTCAAACCCTGCTGGCAAATTATTAAATCGAGAAACACTACTTGATCTTCTGGACTTCGCTAGAGAGAAGAACATTCATATAATCTCTAATGAAATATTTGGCGGCTCTGCTTATAGAAACGAAGAGTTTGTGAGCATGGCAGAAATCATGGAAGCGGAAGATCATGATCGGGGCAGAGTTCATATAGTGTTTGATTTGGCAAATGAGCTATATGTTCCAAGTTTTAATGTAGGAGTTATCTACTCCTATAATGAGAATGTTGTGGATGCCTCCAAAAAAATGGCACAATTCTCAACTGTTTCTGCTCCAACTCAGCAATTGCTTATCACCATGATTTCAGATACAAGGTTTATTCAAGAACTCATAAAGACCAACAAGTTGAGGCTGCAAAATATGTATACTGCATTTGTGGCAGGATTAGAGCAGTTAGGAATTGAGTGCACCAGAAGCAGTGGTGGCTTTTGCTGCTGGGCTGACATGAGTAGATTCATCCGTTCTTACAGTGAAAAGGGGGAACTGGAGCTCTGGGACAGATTGCTGAATGTAGCTAAGATCAATGTTACTCCGGGATCCTCTTGTCACTGTATTGAACCTGGATGGTTCCGTTTTTGTTTTACTACATTGGCTGAAAATGATATTCCTGTAGTAATGGAACGGATCGGGAGAATTTTCGAGACTACAAGTTGA 1491 0.4212 MKIIVPLQGVVQGTGGLFWGSVIPCALFYFLQLYFKTRNRQSPPSNNLPPPELPALSRSLSPRIRGSTTAVHISGRVNSIIATDSPYYVGLNKVADNPYHRIHNPDGVIQLALAQNTLCVDLIEEWICHNGSAAILGTTSNCGCLSITDLATYHGFMDFKVVVAGFMSQVLEKPVFFNPSHMVLTAGAIPAIEILSFCLADNGNAFLVPTPHSPGFDEAIKWRSGVDVVYVSCRSADDFNISITALDQAFNQAKKRSQKIRGVIISNPSNPAGKLLNRETLLDLLDFAREKNIHIISNEIFGGSAYRNEEFVSMAEIMEAEDHDRGRVHIVFDLANELYVPSFNVGVIYSYNENVVDASKKMAQFSTVSAPTQQLLITMISDTRFIQELIKTNKLRLQNMYTAFVAGLEQLGIECTRSSGGFCCWADMSRFIRSYSEKGELELWDRLLNVAKINVTPGSSCHCIEPGWFRFCFTTLAENDIPVVMERIGRIFETTS 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00419 496 SUPERFAMILY PLP-dependent transferases 86 493 IPR015424 -
Mepo5g00419 496 Pfam Aminotransferase class I and II 147 488 IPR004839 GO:0009058|GO:0030170
Mepo5g00419 496 Gene3D Aspartate Aminotransferase, domain 1 97 487 IPR015422 GO:0003824
Mepo5g00419 496 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 79 490 - -
Mepo5g00419 496 Gene3D - 131 382 IPR015421 GO:0003824
Mepo5g00419 496 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 203 224 - -
Mepo5g00419 496 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 359 382 - -
Mepo5g00419 496 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 257 281 - -
Mepo5g00419 496 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 293 316 - -
Mepo5g00419 496 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 327 351 - -
Mepo5g00419 496 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 144 160 - -
Mepo5g00419 496 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 181 201 - -
Mepo5g00419 496 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 111 137 - -
Mepo5g00419 496 CDD AAT_like 155 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00419 Mepo-Chr5 3701273 3703924 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00419 K14270 - gmx:100783490 701.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00419 5 3701273 3703924 Mepo5g00419 5 3701273 3703924 ECH