Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00371 ATGGCCATCATCATGAAAACAAACCTCTCAATCTTCCTTCTCATAGCCATAACATCCATGGCTGCAGCACAAGCAGGAAGATTCAACATCACAAACAAATGCAACTACACCGTATGGGCCGCAGCCTTCCCCGGCGGTGGCATGAAACTTAACACCGGTGAATCATGGAACATGAACATAACCAACGGTACAAGCAACGCAAGAATCTGGGGTCGAACCAATTGCACTTTCGACAATTCAGGTCTCGGAAAGTGTCAAACCGGTGATTGTAACGGGACACTAGAGTGTAAAACAATAGGTACACCACCAAACACAATCATGGAATTTGCTTTGAACATGTATAATGACCTTGATTTCTACGATGTGTCGCTTGTACAAGGTTTCAATATTCCAATTCTGTTAAAACCGTCTTTAAATTCTTGTGGTACCGTTAATTGTACCGCCGATATTAACGGAGAATGTCCTACTCAACTTAAGGTACCAGGTGGATGTAACAATCCTTGTACTACGTTTGATACAACTGAATATTGTTGCAACTCTGATTCTGCTAGATCTGCAGCTACCAATGCCTCTGCCACGTGTGGTCCAACTACTTTTTCTAAGTTCTTTAAGGATAGGTGCCCTTATGCTTATAGTTACCCTAAAGATGATGCAACCAGCACATTCTCTTGTATGGGAGGAACAACTTATGATGTTGTCTTTTGTCCTTAA 711 0.4205 MAIIMKTNLSIFLLIAITSMAAAQAGRFNITNKCNYTVWAAAFPGGGMKLNTGESWNMNITNGTSNARIWGRTNCTFDNSGLGKCQTGDCNGTLECKTIGTPPNTIMEFALNMYNDLDFYDVSLVQGFNIPILLKPSLNSCGTVNCTADINGECPTQLKVPGGCNNPCTTFDTTEYCCNSDSARSAATNASATCGPTTFSKFFKDRCPYAYSYPKDDATSTFSCMGGTTYDVVFCP 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00371 236 ProSiteProfiles Thaumatin family profile. 25 236 IPR001938 -
Mepo5g00371 236 ProSitePatterns Thaumatin family signature. 81 96 IPR017949 -
Mepo5g00371 236 SUPERFAMILY Osmotin, thaumatin-like protein 27 236 IPR037176 -
Mepo5g00371 236 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Mepo5g00371 236 PRINTS Pathogenesis-related protein signature 46 55 IPR001938 -
Mepo5g00371 236 PRINTS Pathogenesis-related protein signature 226 235 IPR001938 -
Mepo5g00371 236 PRINTS Pathogenesis-related protein signature 118 134 IPR001938 -
Mepo5g00371 236 PRINTS Pathogenesis-related protein signature 68 79 IPR001938 -
Mepo5g00371 236 PRINTS Pathogenesis-related protein signature 81 110 IPR001938 -
Mepo5g00371 236 Gene3D Thaumatin 26 236 IPR037176 -
Mepo5g00371 236 SMART tha2 28 236 IPR001938 -
Mepo5g00371 236 Pfam Thaumatin family 32 236 IPR001938 -
Mepo5g00371 236 PANTHER OS03G0233200 PROTEIN 13 236 IPR001938 -
Mepo5g00371 236 PIRSF PR5 1 236 IPR001938 -
Mepo5g00371 236 FunFam Thaumatin I 26 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00371 Mepo-Chr5 3257365 3258557 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00371 11 236 Receptor kinase-like Gene Family AT5G38280 36.694 9.51e-46 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00371 - - tpra:123909017 442.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00371 5 3257365 3258557 Mepo2g04579 2 54227554 54228515 PCT