Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00347 ATGAGGCAGATGAAGCCGTTGGAGTTGTTTCACGATTTGGTAAAAACAACAAAGAACGAACGTGGAAGGTTGATGGGTTTAGATGTCGGTGATAAATATGTTGGTCTCGCTCTTTCTGATTTTGATAACAAAGTTGCTTCTCCTTTCAGTGTTCTTGTCAGGAAGAAGAGTAACGCTAGTTTAATGGCTGCTGATTTTAAGAGTCTGATCTCTAAATATTCCTTGAAGGGTCTTGTTATTGGCGTCCCTTTTGAATATAATCTGGTTTCTCCTGATGCTGTGCAAGTGAAGGTCCTCATTGATAACCTCCGTAGAACAAACATGCTTGAAGGTCTAAAGTATACATATTGGAATGAGTGCTTCACATCAAAGAATGTAGAGTTATTCTTAAAGCCTTTGAACTTCAAAAATGCAGTTCAGTCTAAAACTATGCTAGACAAGTTTGCTGCTGTAGGAATACTTCAAGGGTACATGGACTATGTTAACAGAAAAGCAAAGCAGACAGCACTGGAATAA 516 0.3857 MRQMKPLELFHDLVKTTKNERGRLMGLDVGDKYVGLALSDFDNKVASPFSVLVRKKSNASLMAADFKSLISKYSLKGLVIGVPFEYNLVSPDAVQVKVLIDNLRRTNMLEGLKYTYWNECFTSKNVELFLKPLNFKNAVQSKTMLDKFAAVGILQGYMDYVNRKAKQTALE 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00347 171 SMART rnase_8s 22 126 IPR006641 GO:0006139
Mepo5g00347 171 SUPERFAMILY Ribonuclease H-like 22 162 IPR012337 -
Mepo5g00347 171 FunFam Putative pre-16S rRNA nuclease 21 169 - -
Mepo5g00347 171 CDD YqgF 24 160 IPR005227 GO:0006364
Mepo5g00347 171 Hamap Putative pre-16S rRNA nuclease [yqgF]. 22 162 IPR005227 GO:0006364
Mepo5g00347 171 Pfam Holliday junction resolvase 23 159 IPR005227 GO:0006364
Mepo5g00347 171 Gene3D - 22 169 IPR037027 GO:0006139
Mepo5g00347 171 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 1 167 IPR005227 GO:0006364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00347 - - lja:Lj0g3v0306549.1 256.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00347 5 3049640 3052041 Mepo5g00347 5 3049640 3052041 ECH