Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00325 ATGGAAGATCTTCGAAACTCGTCGCTAAAGTTTTTCACCGATCAAGAGCTTTGCTACGCCGATATCGTTCCTCCTTCTCAGGTTCGAGCAAGAATTGAAGTTTCAGTTCTCAGTTTCCTCAAAATATTGAATGCATCAAACCCTGCCATCTCTGATTTGCCTCTGATTCAAAGAAAATTGAGCAACAGTCGGGTTAATCATGGCCTGTTGACCGAATTATCATATGTTTTTCTCTCCAATTCTGTATCTACAAGGTCTCTTATGAGACCTAATGCAGCAAAAGCCTTTGTTAGGGTGTGGAAGGTGATGGAAATGTGCTATCAGATACTGCTTCAGGAAAAGCGTGTCACACAGAGGGAACTCTTCTACAAGCTTCTGTGTGATTCACAACATCTGTTTCCTTCTCAAAAGGATGTCAATAGGACAATTCAAGATCTTGTAGCGTTGCTTCGGTGCAGCAGATACAGTCTTGGAATCATGGCATCTAGTCGAGGACTCATTGCTGGGCGTCTGATTTTGCAGGAACCGGGCAAAGAGGCTGTTGATTGCTCTGTGTGTGGATCTTCTGGACATGCAATTTCTGGTGACTTGAATTTGTTAGATAAATTGATTCTAAATGCAGATGCGCGTTACATTATAATTGTGGAAAAACATGCAATATTTCAACGGCTTGCTGAAGATAGGTTTTTTAATCAAATTCCAAGCATTCTTATCACGGCTAAAGGTTACCCAGATATTGCCACAAGATTTCTTCTTCATCGAATCTGTCGAGCATTTCCAGACTTGCCAATTTTAGCTTTGGTGGATTGGTACGCTTGCAATGTCAAGTGGTTAGGACTACGGGGGCATGATCTACCCATGCTACCTGATCAATCTTTCGTTCCATTGAAGACAAAGGACCTACAAATTGCTCAAAGCTTGATGTCCTCAAGAATTTTACCGGGGAATTACAAGGAAGAGGTCACTTTGATGGTTGAGAGCGGCAGGAGAGCTGAAATTGAAGCCCTATACTTTCATGGATATGATTATTTGGGGAAGTACATAGCTAAGAAAATTGTACAGTCCGATTATATATAA 1077 0.4132 MEDLRNSSLKFFTDQELCYADIVPPSQVRARIEVSVLSFLKILNASNPAISDLPLIQRKLSNSRVNHGLLTELSYVFLSNSVSTRSLMRPNAAKAFVRVWKVMEMCYQILLQEKRVTQRELFYKLLCDSQHLFPSQKDVNRTIQDLVALLRCSRYSLGIMASSRGLIAGRLILQEPGKEAVDCSVCGSSGHAISGDLNLLDKLILNADARYIIIVEKHAIFQRLAEDRFFNQIPSILITAKGYPDIATRFLLHRICRAFPDLPILALVDWYACNVKWLGLRGHDLPMLPDQSFVPLKTKDLQIAQSLMSSRILPGNYKEEVTLMVESGRRAEIEALYFHGYDYLGKYIAKKIVQSDYI 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00325 358 PANTHER MEIOTIC RECOMBINATION PROTEIN SPO11 273 358 IPR002815 GO:0003677|GO:0003918|GO:0005694
Mepo5g00325 358 Gene3D - 272 358 - -
Mepo5g00325 358 Gene3D - 163 271 - -
Mepo5g00325 358 Gene3D - 22 162 IPR036388 -
Mepo5g00325 358 CDD TOPRIM_TopoIIB_SPO 210 343 IPR034136 -
Mepo5g00325 358 SUPERFAMILY DNA topoisomerase IV, alpha subunit 93 358 IPR036078 GO:0003677|GO:0005694
Mepo5g00325 358 Pfam Type IIB DNA topoisomerase 94 159 IPR013049 GO:0003677|GO:0003824|GO:0005524|GO:0005694|GO:0006259
Mepo5g00325 358 PRINTS DNA topoisomerase VI subunit A family signature 212 229 IPR002815 GO:0003677|GO:0003918|GO:0005694
Mepo5g00325 358 PRINTS DNA topoisomerase VI subunit A family signature 154 169 IPR002815 GO:0003677|GO:0003918|GO:0005694
Mepo5g00325 358 PRINTS DNA topoisomerase VI subunit A family signature 136 153 IPR002815 GO:0003677|GO:0003918|GO:0005694
Mepo5g00325 358 PRINTS DNA topoisomerase VI subunit A family signature 236 257 IPR002815 GO:0003677|GO:0003918|GO:0005694
Mepo5g00325 358 FunFam Meiotic recombination protein SPO11-2 18 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00325 Mepo-Chr5 2864511 2868041 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00325 K10878 - gmx:100784732 628.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00325 5 2864511 2868041 Mepo5g00325 5 2864511 2868041 ECH