Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00324 ATGGGATTTTATTTGTTGATAAGTGGTTTGATCTTGTGGTTTGCCATGAGTAACAAGAATAATGGTCTATTAGCCATAATGGATGAGGAATTAATTAGTAAAAGTTCCTCATCTAGTTACAACTATGCAGATGCTCTTGGCAAAGCAATCTTGTTTTTTGAAGGACAACGCTCAGGGAAATTGCCTAAAGACCAAAGAGTGAAGTGGAGGGGTGATTCAGCACTCTCTGATGGCAAGCCTCAAAATGTGAATTTGGTTGGAGGATACTATGATGCTGGTGATAATGTCAAGTTTGGATGGCCAATGTCATTTACAGTCAGCTTACTGAGTTGGGCTGCTGTTGAATATGAAAGTGAGATTTCTTCAGTTAGCCAGATTGATTATCTCCGCCGTGCTATTCGTTGGGGTACAAATTTCATACTTCAATCTCACACTTCTCCAACCACGCTCTTCACACAGGTTGGAGAAGGAAACGTAGATCATCAATGTTGGGAGCGTCCAGAAGACATGGATACTCCAAGAACACTTTACAAGATTGATGCTAATTCCCCTGGAACTGAGGCTGCAGCTGAGGCTGCTGCTGCACTTTCAGCTGCTTCAATTGTCTTTAAGAAAAAAGATACTGAATATTCGTCGAAGTTGTTAAGACATTCAAAATCTTTGTTTGATTTTGCTGACAAGTATAGAGGCACCTACACAGGTTCTTGTCCATTCTACTGCTCGTACTCTGGTTACCAAGATGAACTGTTATGGGCTGCTGCTTGGTTATACAAGGCTAGTGGAGAAAGCAAGTACTTGAAATACATCACAGATAACCAAGGTTGGAATCAGGCAGCATCTGAGTTCAGCTGGGATAACAAATTTGTTGGAGTTCAAACATTACTAACACAGGAATTCTATGGTGGGAAGAAGGACTTGGCCAAGATTCATAGTGATGGTGAATCATTTATATGTGCATTGATGCCTGGAAGTTACTCTCTACAGATTAAAAAAACTCCTGGTGGACTTTTGTATACTAGAGATAGTAGTAACTTGCAATACACCACGACCTCAACCATGGTACTATTCATTTTCTCCAAAATCCTAAACAAAAATCATATTGATGGAATTCATTGTGGCTCTACCAATTTCACCTCCTCTGAAATTAGAGCCTTTGCAAAATCACAGGTGGACTATATACTAGGAAACAATCCCATGAAGATGTCATACATGGTGGGATATGGAAGTAAATATCCAAAGCAGTTACATCACAGAGGTTCTTCCATCCCTTCAATCAAAGTTTACCAGACCAAAGTGGGTTGCAATGATGGTTACACAGATTATTACTATTCCTCTAATCCTAATCCTAATATTCATGTGGGTGCTATTGTTGGAGGCCCTAATTTTAATGACCACTTTAATGATGCAAGATCTGATTACTCTCATTCTGAACCTACCACTTACATGAATGCTGCTTTCATAGGTTCTGTGGCAGCTTTGATTGGCGAAATTAAAACCGGGACTATGTAG 1509 0.3983 MGFYLLISGLILWFAMSNKNNGLLAIMDEELISKSSSSSYNYADALGKAILFFEGQRSGKLPKDQRVKWRGDSALSDGKPQNVNLVGGYYDAGDNVKFGWPMSFTVSLLSWAAVEYESEISSVSQIDYLRRAIRWGTNFILQSHTSPTTLFTQVGEGNVDHQCWERPEDMDTPRTLYKIDANSPGTEAAAEAAAALSAASIVFKKKDTEYSSKLLRHSKSLFDFADKYRGTYTGSCPFYCSYSGYQDELLWAAAWLYKASGESKYLKYITDNQGWNQAASEFSWDNKFVGVQTLLTQEFYGGKKDLAKIHSDGESFICALMPGSYSLQIKKTPGGLLYTRDSSNLQYTTTSTMVLFIFSKILNKNHIDGIHCGSTNFTSSEIRAFAKSQVDYILGNNPMKMSYMVGYGSKYPKQLHHRGSSIPSIKVYQTKVGCNDGYTDYYYSSNPNPNIHVGAIVGGPNFNDHFNDARSDYSHSEPTTYMNAAFIGSVAALIGEIKTGTM 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00324 502 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 466 484 IPR033126 -
Mepo5g00324 502 Pfam Glycosyl hydrolase family 9 42 488 IPR001701 GO:0004553|GO:0005975
Mepo5g00324 502 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 392 418 IPR018221 -
Mepo5g00324 502 Gene3D - 37 502 IPR012341 GO:0005975
Mepo5g00324 502 FunFam Endoglucanase 38 498 - -
Mepo5g00324 502 SUPERFAMILY Six-hairpin glycosidases 39 497 IPR008928 GO:0005975
Mepo5g00324 502 PANTHER ENDO-1,4-BETA-GLUCANASE 30 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00324 Mepo-Chr5 2860044 2863449 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00324 23 494 Glycoside Hydrolase AT4G23560 68.856 0.0 658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00324 - - cam:101489803 873.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00324 5 2860044 2863449 Mepo5g00324 5 2860044 2863449 ECH