Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00322 ATGGAAACGAACACTTCGACGCCGTTGTCGACGCTACCTGAATCAGGTGCAATGACTGCGACCGGAAACGCAGTATCACCGTCGCTAGTCAATTTATACAGAATCACCAAAGTTCTGGAGCGTTTGGCTACACACTTTGTACCTGGCAATCGTAGCGATGCTTTCGAATTTTTTAACCTATGTCTCTCCCTCTCCAGAGGGATTGATTATGCACTTGCAAACGGGGAAGTTCCACTGAAAGCTAATGAATTACCTATTTTGATGAAACAGGTTTATGGCATTTACTTTTCCTCTCCGACACAAATGTATCAAAGAAAGACCGATGAACATTCACAAGCAGCTGTGATGGTTTTGATGATCTCTGTGAAGAATGCCTGTGAAATTGGATGGTTCCAGGAGAATGATTCCAAAGAACTTTTAAATATTGCTGACAAGATAGGAAAAAACTACTGCACGCTGGGAAATGCAATTGCCGAACCTAATTCTTGCCATCCTGCAGTATTAACTATAATGCAAAGGTACTATCCTAATATGGAATTGGGTCCAATAATCGTGTCAATCGAAGCCAAGCCTGGTTATGGAGCTTCTGCTGTTGACTTCCATATCACAAAGAATAATGTTCATTCAGATAAAAAAATTTGGTTGTTGGTGGCCCAAATTGATAAAATTGAGACGTCTGCATGCCTCATCAGCCCTCAGCAAGTGAACATTCTCCTGAATGGAAAAGGAATTGATACAAGAACCAACTTTCGAATGGATCCTGGACCACAGATGCCCACCAGTGTGACTAGTATCCTTAAATTTGGGACAAATCTTCTTCAAGCTGTGGGTCAGTTCAGTGGGCATTATATTATACTTGTTGCCTATATGAGTGTTGGATCCTTGCCTGCACATCCAGTTCTTCCACCAGATTATGTTCAGCCTGCTGTATCTGTTGATGCAGATTCAGATATTATCGAGGGAGAATCAAAAATCTCTCTTAATTGTCCGATAAGCCGTACCCGTATCAAGACTCCTGTTAAAGGGCATTCATGCAAACATTTTCAGTGCTTCGACTTTGACAACTTCATTAAAATAAATTTTAAGAGGCCATCCTGGCGCTGCCCCCATTGCACTCAGCCTGTCTGCTATACAGAAATTCGTCTTGACAGAAACATGATTGAGGTCCTGGAAAAAGTTGGTGAGAACATTGTGGAAGTGACTTTTGAAGCTGATGGATCGTGGAAGGTAGGCTCAGAAAAGGATCATGACGTGAATAAGATACAGAATAAGGCCTACGATTGTGAAATCGAACAGACCGAACAACAAGAATCTACTTGCCCCCCTGATATCGTTTCCAATATTGTGGACCTCACCAACAATGAGAATGATTTGGACATAATGTGCACTTGTGAAACTGCAGATAGAAAGCCTTTTCAGGCTTCTGCTCCTACCGGCGTTCAAATAGAGGATGACTTTTGGGCTGGTCTTTATATTGCCAACGGTGGGTCTGGTACCCCTACAGCTGTCGTTGAGATTCCTGAACTGGCTGATGCTGTTTCTCCTGTATTTAATCAAGGAGCAGAGGGTCATGACAATGTTCATGCCATGCATAACCAGTTTTTAGGACAGAATAATTTGACGCTGATGAATTATATGAATTCAAACGAGTATGGGAGGTCATCATCGGCAGCGAGACTTATTCATAGGACTCCTACAGCTATTCAGGCCCTCCCAGTCCAATCTCAGACATTAGGACCACAGCAAAATCCAGCAACTAATTTGGATTCCTTGATAACCAGCAATCCATCTGCTGCTCCTCATGTTTCTTTGTCCAACCCTGCCTCTGCAGATCCTTACAATGCCATTCTGAGTGATGCAGAAAGACAGCAACTTTTTTCTCGATCCGCATTGAATGTGCCTCCTGTCTCAGCAGCAACACAGAACCGAGTGCCAACAGTTAATATGTCAGCCCCAACTCATAACCGAGTACTGCCAGTTAATATGTCAGCTGCTACTCATAACCGAGCACCAAGTCAATTGCATAACCCACCACACAGAACAGATATGCTGAATGACTTCAGAAATTCACACCTTCAGCAAACTCTGAATGCCCATGCACACCAACCAATGCAACCATCAAATGCTCAACGATCTCACATCCAACAAGGGGGTTCACAAGCTTATGCAGCTGGAGCTACAGCAAGTAGCCAACAGGCCAGGGTTATGGCTTCATCACATGTTGCCAGACAAGGAGAGCAAAGAGGACCACCAGTTCAGGCAGTTTCTAGTACTGATGAATTGTTCAATTCACAACCAGATCAGAATTGGCGTCCTACGCGAATGCGTGGAAGTCTTTCAGGTCAGCAACTTACTGAAGATGTTAGGCAGCGATTGATTATGCCATCATCACATCAAGTTCAAAGTTTAAGACCACAAGGTCCACAACCAGGCCGACCAACATCCCCACTGGATGCACTCATTGCTAACAATCGAAATGCTCAGAATCCTTCGAGACCGTGA 2502 0.4369 METNTSTPLSTLPESGAMTATGNAVSPSLVNLYRITKVLERLATHFVPGNRSDAFEFFNLCLSLSRGIDYALANGEVPLKANELPILMKQVYGIYFSSPTQMYQRKTDEHSQAAVMVLMISVKNACEIGWFQENDSKELLNIADKIGKNYCTLGNAIAEPNSCHPAVLTIMQRYYPNMELGPIIVSIEAKPGYGASAVDFHITKNNVHSDKKIWLLVAQIDKIETSACLISPQQVNILLNGKGIDTRTNFRMDPGPQMPTSVTSILKFGTNLLQAVGQFSGHYIILVAYMSVGSLPAHPVLPPDYVQPAVSVDADSDIIEGESKISLNCPISRTRIKTPVKGHSCKHFQCFDFDNFIKINFKRPSWRCPHCTQPVCYTEIRLDRNMIEVLEKVGENIVEVTFEADGSWKVGSEKDHDVNKIQNKAYDCEIEQTEQQESTCPPDIVSNIVDLTNNENDLDIMCTCETADRKPFQASAPTGVQIEDDFWAGLYIANGGSGTPTAVVEIPELADAVSPVFNQGAEGHDNVHAMHNQFLGQNNLTLMNYMNSNEYGRSSSAARLIHRTPTAIQALPVQSQTLGPQQNPATNLDSLITSNPSAAPHVSLSNPASADPYNAILSDAERQQLFSRSALNVPPVSAATQNRVPTVNMSAPTHNRVLPVNMSAATHNRAPSQLHNPPHRTDMLNDFRNSHLQQTLNAHAHQPMQPSNAQRSHIQQGGSQAYAAGATASSQQARVMASSHVARQGEQRGPPVQAVSSTDELFNSQPDQNWRPTRMRGSLSGQQLTEDVRQRLIMPSSHQVQSLRPQGPQPGRPTSPLDALIANNRNAQNPSRP 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00322 833 ProSiteProfiles Zinc finger SP-RING-type profile. 314 395 IPR004181 GO:0008270
Mepo5g00322 833 Pfam MIZ/SP-RING zinc finger 325 373 IPR004181 GO:0008270
Mepo5g00322 833 MobiDBLite consensus disorder prediction 750 783 - -
Mepo5g00322 833 MobiDBLite consensus disorder prediction 698 738 - -
Mepo5g00322 833 CDD SP-RING_PIAS-like 326 373 - -
Mepo5g00322 833 MobiDBLite consensus disorder prediction 819 833 - -
Mepo5g00322 833 MobiDBLite consensus disorder prediction 796 833 - -
Mepo5g00322 833 PANTHER ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN 34 454 - -
Mepo5g00322 833 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 303 410 IPR013083 -
Mepo5g00322 833 MobiDBLite consensus disorder prediction 698 783 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00322 Mepo-Chr5 2828011 2837533 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00322 K04706 - gmx:100780539 842.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00322 5 2828011 2837533 Mepo5g00322 5 2828011 2837533 ECH