Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00298 ATGGATGAAGAATTAGTTGATGAAAGAATTCAGTTAGAGGCTGTTGAGGATTCACAGCGTCAGGTCAAAGACGACATAAAATCCCAATATGATGGTAAAAATGTAGTTGAGGCTGTTAGCGAAGCAGCAGATACATCACAACATCCATATGAAACAGTTGAAGAATTAACAGTAAAAAGTTACAATGGTTTTAGTTTTGATATTGGCACTTCTACTACTCAAGTTCAACATAAACATTGGCAGAATCTTTATCAGATTGGAAATAATTCAGGGAATGGGAATTCAATTAGTGATATTGGGTTGATTAGTAGTGGGCCCGCAGCTACGTCTAGTGCTTGGGAGGATGTTGGATCCACCTCGTTTCCGGAGTTATTAGCTAGAAAATCGCATAGTGATGGTCAGAGTAATGCAGTTGAACATTTGGCGGCTGCGGAAAGTAAGGAGGGTGTAGGACCCGCAGGTGATGTTCGTCGAGGAATACGGACAAAGATGATATCCAAATCAGGGTTTGCTGAGTATTTTATTAAAAATACGTTGAAGAGTAAGGGTGTTGTACGTAAAGGTCCACCTTCTGATCGCGTATATGTCCAGTCTAGAGAGCAAAATCAGACAAAGGTGGGCGGTGATGCAAATCAAAATTGGGGTAAGATTGGCGTTGGCACAAATAAGAATCAGATGAAGACGAGCACTGACACAGATCAGAAACAAATGAAGACGGGTATTGGTGCTCAGTCAAACTCTAATGTATCAGTGAACCGTGGTTCCAAGACTGCAAAGTTTCCGATTCACAGCGATGCTGCAGTGCCTAAATCTAGCACGACTGAATACGACGGTGTAACATTGAGAGAATGGTTAAAATCTGGCCAGCGCAAATCAGGCAAAGTGGAAAGTTTAAATATATTTAGGAAAATTGTGGATTTGGTGGATGATTCGCACTCTCGGGGAATTGCGTTGCATAACCTTTATCCATCTTACATCAAATTGCTACCATCAAATCAGGTAATGTACATCGGATTACCTACTCAAAAACAGATGGCAGGTAAAAGGGTGTCTGAGCAAGTAACATCCTCCTCTGTTGATATGGGGTCCAAGAAACAAAAATTTGACGAGAGTGCGAGGGTTACTGGGAGTGACTTGTGTCCTGAGACTGCTAATCATCATGAAGTTCAAATGCCTTCAGTTGGATCACAAGATTACCGTAGCAGATATGAGGAAGATAACCAATTTTCTGTATATAATTTTGGGAGAATGTCTAGCATCCCTCGTGTATCTAATTCAGGTCAATTGTCACCTACCAGTAATTCGTTATGTGAAAGATGGGAAAATAAGTGGTATGCGAGTCCTGAGGGAGGTTGCACTATATCATCAAATATCTACTGCCTTGGTGTCCTCCTTTTCGAGTTACTAGGTCATTTTGACTCTGAAAGAGTGCATATTGCAGCAATGTCTGATCTTCATCATAGGATTCTTCCTCCAGCTTTCCTATCAGAAAATCCTAAAGAAGCTGGATTTTGTCTCTGGCTGCTGCATCCTGAACCATCAGCACGTCCAACAACAGGGGAAATCCTACAATCTGAAGTGATTAATGGATTACAGGAGTTGTGTAATGAGGAATTGTCATCATGTATAGACCAAGAAGATGCAGAGTCGGAATTGTTATTGCATTTCCTCATCTCATCGAAAGAACAGAAGCAGGGTGATGCCTCCAAGTTGGTTGAACAATTAGAGTGCTTGGAATCAGATATAGAAGAGGCAGAGAGGAGGCATGGCTTAAGAAAATCCTTGGTTTCCTCTGGCTGGCAGAACAATTACTCTTGTCAGGGAGAGATTTTGCCTCTTCAAAAGAAATTTTTGAGTGTAGAAAGACCGCCCACAGTGTCCCCAATCTCCAATACAAATGAACTGAGATTGATGAAAAATATAGGCCATCTTGAAAGTGCTTACTTTTCCATGAGATCCAAAGTTCAGATTTCTGAAACAGATGCCACAGATCACCCAGATAAAGATATACTAAGAACTCGCGAGAACTGGTCTGTGACCCAAAAAGCTGAGGAGCAGCATAAAAGTAAAGATGCTTTAGGAACCTTCTTTGATGGTTTGTGCAAGTATGCACGTTACAGCAAGCTTGAAGTGCGGGGTATACTAAGAAATGCAGATTTTAACAATCCTGCAAATGTTATATGCTCTCTGAGCTTTGACCGGGATGAAGATTACTTTGCTTCTGCTGGGATATCTAAGAAAATAAAAATCTTTGACTTCAATACACTTTGCAATGACTCTGTTGATATCCATTATCCTGCTGTTGAGATGTCAAACAGATCAAAGCTTAGCTGTGTTTGCTGGAATAGCTATATTAAGAACTATCTTGCCTCTACAGACTACGACGGTGTAGTGAAGTTATGGGATGCTAGTACAGGTCAAGAATTTTCTCAATACAGTGAACATGAAAAGAGGGCTTGGTCTGTTGACTTTTCTCCGGTGTGCCCTACAAAATTTGCCAGTGGAAGTGATGATTGTACTGTCAAGCTGTGGAGCATTAGTGAGAGAAACTCTTTGGGCACAATAAGGAATGTTGCTAATGTCTGCTGTGTTCAATTTTCTGCTCATTCCTCTCATTTGCTGGCCTTTGGATCTGCGAATTACTCAACTTACTGTTATGATCTTCGCAATCTTAGAAGTCCCTGGTGTGTATTGACTGGCCATCGTAAAGCTGTAAGCTATGTCAAATTCTTAGACTCTGAAACACTTGTTTCTGCATCTACTGATAATTCATTGAAGATCTGGGATCTCAATAAAACCTCTTCGGTTGGTTCATCCACTAGTGCTCGCAGCATAACCCTGTCTGGACATACTAATGAAAAGAATTTTGTGGGTTTGTCTGTTGCTGATGGATATATTGCATGTGGTTCAGAATCAAACGAGGTTTACACCTACTATAAGTCGCTTCCCATGCCAATTACTTCACACAAGTTTGGATCTATTGATCCCATCTCTGGTAAAGAGACTGATGATGACCATGGTCAGTTTGTTTCAAGTGTGTGCTGGAGAGGGAAATCAAACACGCTTCTTGCTGCCAATTCAAGTGGATGTATAAAAGTGTTACAAATGGTTTAA 3114 0.4088 MDEELVDERIQLEAVEDSQRQVKDDIKSQYDGKNVVEAVSEAADTSQHPYETVEELTVKSYNGFSFDIGTSTTQVQHKHWQNLYQIGNNSGNGNSISDIGLISSGPAATSSAWEDVGSTSFPELLARKSHSDGQSNAVEHLAAAESKEGVGPAGDVRRGIRTKMISKSGFAEYFIKNTLKSKGVVRKGPPSDRVYVQSREQNQTKVGGDANQNWGKIGVGTNKNQMKTSTDTDQKQMKTGIGAQSNSNVSVNRGSKTAKFPIHSDAAVPKSSTTEYDGVTLREWLKSGQRKSGKVESLNIFRKIVDLVDDSHSRGIALHNLYPSYIKLLPSNQVMYIGLPTQKQMAGKRVSEQVTSSSVDMGSKKQKFDESARVTGSDLCPETANHHEVQMPSVGSQDYRSRYEEDNQFSVYNFGRMSSIPRVSNSGQLSPTSNSLCERWENKWYASPEGGCTISSNIYCLGVLLFELLGHFDSERVHIAAMSDLHHRILPPAFLSENPKEAGFCLWLLHPEPSARPTTGEILQSEVINGLQELCNEELSSCIDQEDAESELLLHFLISSKEQKQGDASKLVEQLECLESDIEEAERRHGLRKSLVSSGWQNNYSCQGEILPLQKKFLSVERPPTVSPISNTNELRLMKNIGHLESAYFSMRSKVQISETDATDHPDKDILRTRENWSVTQKAEEQHKSKDALGTFFDGLCKYARYSKLEVRGILRNADFNNPANVICSLSFDRDEDYFASAGISKKIKIFDFNTLCNDSVDIHYPAVEMSNRSKLSCVCWNSYIKNYLASTDYDGVVKLWDASTGQEFSQYSEHEKRAWSVDFSPVCPTKFASGSDDCTVKLWSISERNSLGTIRNVANVCCVQFSAHSSHLLAFGSANYSTYCYDLRNLRSPWCVLTGHRKAVSYVKFLDSETLVSASTDNSLKIWDLNKTSSVGSSTSARSITLSGHTNEKNFVGLSVADGYIACGSESNEVYTYYKSLPMPITSHKFGSIDPISGKETDDDHGQFVSSVCWRGKSNTLLAANSSGCIKVLQMV 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00298 1037 SUPERFAMILY Protein kinase-like (PK-like) 274 535 IPR011009 -
Mepo5g00298 1037 ProSitePatterns Trp-Asp (WD) repeats signature. 916 930 IPR019775 -
Mepo5g00298 1037 SMART WD40_4 996 1035 IPR001680 GO:0005515
Mepo5g00298 1037 SMART WD40_4 891 929 IPR001680 GO:0005515
Mepo5g00298 1037 SMART WD40_4 848 887 IPR001680 GO:0005515
Mepo5g00298 1037 SMART WD40_4 762 802 IPR001680 GO:0005515
Mepo5g00298 1037 SMART WD40_4 713 752 IPR001680 GO:0005515
Mepo5g00298 1037 SMART WD40_4 940 979 IPR001680 GO:0005515
Mepo5g00298 1037 SMART WD40_4 805 845 IPR001680 GO:0005515
Mepo5g00298 1037 Pfam WD domain, G-beta repeat 807 845 IPR001680 GO:0005515
Mepo5g00298 1037 Pfam WD domain, G-beta repeat 897 929 IPR001680 GO:0005515
Mepo5g00298 1037 PANTHER PROTEIN SPA1-RELATED 2 33 1037 IPR044630 GO:0009640
Mepo5g00298 1037 FunFam E3 ubiquitin-protein ligase RFWD2 isoform X1 695 1037 - -
Mepo5g00298 1037 ProSitePatterns Trp-Asp (WD) repeats signature. 789 803 IPR019775 -
Mepo5g00298 1037 MobiDBLite consensus disorder prediction 200 233 - -
Mepo5g00298 1037 ProSiteProfiles Trp-Asp (WD) repeats profile. 812 854 IPR001680 GO:0005515
Mepo5g00298 1037 SUPERFAMILY WD40 repeat-like 721 1034 IPR036322 GO:0005515
Mepo5g00298 1037 Coils Coil 561 588 - -
Mepo5g00298 1037 ProSiteProfiles Trp-Asp (WD) repeats profile. 898 938 IPR001680 GO:0005515
Mepo5g00298 1037 MobiDBLite consensus disorder prediction 130 155 - -
Mepo5g00298 1037 Gene3D - 696 1037 IPR015943 GO:0005515
Mepo5g00298 1037 PRINTS G protein beta WD-40 repeat signature 916 930 IPR020472 -
Mepo5g00298 1037 PRINTS G protein beta WD-40 repeat signature 832 846 IPR020472 -
Mepo5g00298 1037 PRINTS G protein beta WD-40 repeat signature 789 803 IPR020472 -
Mepo5g00298 1037 Gene3D Transferase(Phosphotransferase) domain 1 277 538 - -
Mepo5g00298 1037 ProSiteProfiles Trp-Asp (WD) repeats profile. 769 811 IPR001680 GO:0005515
Mepo5g00298 1037 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 898 931 - -
Mepo5g00298 1037 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 812 847 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00298 Mepo-Chr5 2639608 2647620 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00298 832 978 Miscellaneous Gene Families AT5G08390 29.530 2.34e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00298 K16240 - gmx:100778303 1527.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00298 5 2639608 2647620 Mepo5g00298 5 2639608 2647620 ECH