Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00293 ATGGCGTCTCAAGATTCGGCTGGTGAAGGTGCCAAACCTCCTAATCACACTTTTCTAAGTATCTGCAAATCTCTTGTCGCAGGTGGAGTCGCCGGTGGAGTTTCACGAACAGCTGTGGCTCCTCTAGAGAGATTGAAGATTCTGCTGCAGGTTCAAAATCATCACAATGTAAAATACAACGGAACAGTTCAGGGCTTAAAATATATATGGAAAACTGAGGGTTTTAGGGGAATGTTTAAAGGAAACGGAACCAATTGTGCTCGTATTATCCCAAATTCAGCAGTGAAGTTCTTTAGCTATGAGCAAGCATCTAATGGTATTCTAAGTCTCTATCGGTTGCAAACCGGAAATGAAGAAGCTCAGCTCACTCCTCTTCTGCGTCTTGGAGCTGGGGCATGTGCAGGAATCATTGCAATGTCTGCAACTTACCCGATGGACCTGGTGCGAGGACGCATAACTGTACAGACAGAAGCATCTCCTCATCAATACAGAGGAATTTTTAATGCTCTTTCAACAGTCTTCCGGGAAGAAGGCGCTAGAGCATTGTATAAAGGATGGTTACCTTCAGTCATAGGAGTTATACCGTACGTGGGTCTAAATTTTTCTGTATATGAATCTCTAAAAGACTGGTTGATTCAAACAAAACCACTTGGAATTGCTCGAGACTCAGAGCTAAATGTGACCACAAGGCTTGCATGTGGGGCTGCTGCTGGAACTATTGGCCAGACAGTGGCATACCCCCTTGATGTCATTCGCAGAAGAATGCAGATGGGGGGCTGGAAAGGCGCTGCTTCCGTTGTCACTGGTGATGGGAAGGGTAACCTTGTGTATACTGGCATGGTTGATGCATTCAGTAAAACTGTAAAGTATGAGGGATTTGGAGCTTTATACAAGGGCTTAGTACCCAATTCAGTCAAGGTGGTCCCTTCCATAGCCATTGCCTTCGTGACATACGAGATGGTCAAGGACGTTCTAGGAGTTGAAATGAGAATATCTGACTGA 1002 0.4501 MASQDSAGEGAKPPNHTFLSICKSLVAGGVAGGVSRTAVAPLERLKILLQVQNHHNVKYNGTVQGLKYIWKTEGFRGMFKGNGTNCARIIPNSAVKFFSYEQASNGILSLYRLQTGNEEAQLTPLLRLGAGACAGIIAMSATYPMDLVRGRITVQTEASPHQYRGIFNALSTVFREEGARALYKGWLPSVIGVIPYVGLNFSVYESLKDWLIQTKPLGIARDSELNVTTRLACGAAAGTIGQTVAYPLDVIRRRMQMGGWKGAASVVTGDGKGNLVYTGMVDAFSKTVKYEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDVLGVEMRISD 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00293 333 ProSiteProfiles Solute carrier (Solcar) repeat profile. 19 106 IPR018108 -
Mepo5g00293 333 Gene3D Mitochondrial carrier domain 16 327 IPR023395 -
Mepo5g00293 333 PRINTS Mitochondrial carrier protein signature 183 201 IPR002067 GO:0055085
Mepo5g00293 333 PRINTS Mitochondrial carrier protein signature 81 101 IPR002067 GO:0055085
Mepo5g00293 333 PRINTS Mitochondrial carrier protein signature 24 37 IPR002067 GO:0055085
Mepo5g00293 333 PRINTS Mitochondrial carrier protein signature 37 51 IPR002067 GO:0055085
Mepo5g00293 333 PRINTS Mitochondrial carrier protein signature 137 155 IPR002067 GO:0055085
Mepo5g00293 333 PRINTS Mitochondrial carrier protein signature 234 256 IPR002067 GO:0055085
Mepo5g00293 333 ProSiteProfiles Solute carrier (Solcar) repeat profile. 122 210 IPR018108 -
Mepo5g00293 333 FunFam Mitochondrial substrate carrier 17 327 - -
Mepo5g00293 333 Pfam Mitochondrial carrier protein 224 325 IPR018108 -
Mepo5g00293 333 Pfam Mitochondrial carrier protein 20 106 IPR018108 -
Mepo5g00293 333 Pfam Mitochondrial carrier protein 122 213 IPR018108 -
Mepo5g00293 333 PANTHER SOLUTE CARRIER FAMILY 25 20 327 - -
Mepo5g00293 333 SUPERFAMILY Mitochondrial carrier 18 320 IPR023395 -
Mepo5g00293 333 ProSiteProfiles Solute carrier (Solcar) repeat profile. 225 324 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00293 Mepo-Chr5 2593953 2598189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00293 8 328 EF-hand Containing Proteins AT5G51050 38.272 7.18e-65 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00293 K14684 - gmx:100784834 567.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00293 5 2593953 2598189 Mepo5g00293 5 2593953 2598189 ECH